| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_17035-0.8 | TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 | Bpl_scaf_17035 | 20826 | 34899 | + |
| CDS | |||||
| Bpl_scaf_17035-0.8 | |||||
| Transcript |
| Bpl_scaf_17035-0.8 |
| Protein |
| Bpl_scaf_17035-0.8 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | ULD|UFD/UBQ|UBQ_Other |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00240 | ubiquitin | Ubiquitin family | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000626 | Domain | Ubiquitin-like domain | Interproscan |
| IPR029071 | Homologous_superfamily | Ubiquitin-like domain superfamily | Interproscan |
| IPR039049 | Family | Elongin B | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13248 | TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0006368 | Biological Process | transcription elongation by RNA polymerase II | Interproscan |
| GO:0030891 | Cellular Component | VCB complex | Interproscan |
| GO:0070449 | Cellular Component | elongin complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K03873 | TCEB2; transcription elongation factor B, polypeptide 2 | - | Ubiquitin mediated proteolysis | ko04120 | PMID: 28812709 |
| HIF-1 signaling pathway | ko04066 | PMID: 28812709 | |||
| Pathways in cancer | ko05200 | PMID: 28812709 | |||
| Renal cell carcinoma | ko05211 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_17035-0.8 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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