| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_16831-12.11 | TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 4 | Bpl_scaf_16831 | 1218638 | 1229918 | + |
| CDS | |||||
| Bpl_scaf_16831-12.11 | |||||
| Transcript |
| Bpl_scaf_16831-12.11 |
| Protein |
| Bpl_scaf_16831-12.11 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR015915 | Homologous_superfamily | Kelch-type beta propeller | Interproscan |
| IPR029063 | Homologous_superfamily | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46529 | TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 4 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0008175 | Molecular Function | tRNA methyltransferase activity | Interproscan |
| GO:0030488 | Biological Process | tRNA methylation | Interproscan |
| GO:0031591 | Biological Process | wybutosine biosynthetic process | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K15451 | PPM2, LCMT2, TYW4; tRNA wybutosine-synthesizing protein 4 | EC:2.1.1.290 EC:2.3.1.231 | Transfer RNA biogenesis | ko03016 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_16831-12.11 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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