| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_1669-14.11 | UNCHARACTERIZED | Bpl_scaf_1669 | 1406624 | 1435384 | + |
| CDS | |||||
| Bpl_scaf_1669-14.11 | |||||
| Transcript |
| Bpl_scaf_1669-14.11 |
| Protein |
| Bpl_scaf_1669-14.11 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF21237 | Pus10_N_euk | Eukaryotic Pus10, N-terminal | Domain | Interproscan |
| PF21238 | Pus10_C | Pus10, C-terminal | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR020103 | Homologous_superfamily | Pseudouridine synthase, catalytic domain superfamily | Interproscan |
| IPR039894 | Family | tRNA pseudouridine synthase Pus10-like | Interproscan |
| IPR048741 | Domain | Pus10-like, C-terminal | Interproscan |
| IPR048742 | Domain | Pus10, N-terminal, eukaryotes | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21568 | UNCHARACTERIZED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0001522 | Biological Process | pseudouridine synthesis | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0009451 | Biological Process | RNA modification | Interproscan |
| GO:0009982 | Molecular Function | pseudouridine synthase activity | Interproscan |
| GO:0031119 | Biological Process | tRNA pseudouridine synthesis | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K07583 | PUS10; tRNA pseudouridine synthase 10 | EC:5.4.99.25 | Transfer RNA biogenesis | ko03016 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_1669-14.11 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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