Gene detail

Detailed information of Bpl_scaf_16621-20.40 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_16621-20.40	TAL1 SCL INTERRUPTING LOCUS	Bpl_scaf_16621	2112165	2132973	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_16621-20.40

ATGTTGACTCTAGATAGATTTGATCCTGGTGGAGATTCTCTCAACAATAGTTACTCTCTGTCTCCAGGAGATTTGGCAGTTCCATTTCAAGTGATGTTAAATTCAAAGAATGAGAGACAAAGTTCATCAGATGATTACTTACAAGCTTTACATCTGTTAAAACAGAGGTGTAGCAGTAAGAGTTCTATAGACCTCAGTAATTTTCTCCTCACAAAAGGATGGTGTAATATATATACCAGTGGAGATAAATGTGTTCATCATTTAGAATTTGATGTTGTTACCATGGCAACAGAGTTCAAGGCCACTCCCATCACACCTGTTCCTATTGTTCCAACAGCTTTATCTAAAAACCTGTCTGGACCTATGAGTATGAGCCATTTACAAGGCGAACCAAAAACAGGTTGGGTGAGTGGTATATCATTTGTATACAGTCCATACATATGGGCATGCTGTCTCAGATTTCTACATAATGCAACTCTAAATGACAGAGTTTGTGTTCCACCCGAATCATTCTTATTGGTGCTATATAATCCAATGCATTCCAAACCTGAGTTTTATGAAATCATTACCTCAACTGGAAATGGTCAGATGAACTTTGAACTCTTTAATGGATATGAGACAATAACTAGTAGTAGTAGGTCAATAGAAATGGACATTGGTGCTGTAGAAGGTGGACAAAAGAAAGAACAATTTGATGGTGCTATACATTTGCTCAAAACTCAAAAAACTAACAGTCATGATGATGTGTCTGTGTCAACACCTGTATCTACAGCTGATGAAATGACACCTAGAAACATGCCAGCTCCTCACAGATCTCAGCTGCCAGTGATGACTTCTATGGTACCTGAGGTCAGTTTATTGTTTGGTGAAGATTCGGGCATGTTTGTTAACCCAAAGAAACCCACGATCACTCAGGGAAAACCTAATGGTGTTGCTCACACGTCAGATTTCAGACCAAAATTGCCAGTGCTACATGAACAACCAAATGTTCAACAATCGAAAAGTTCTTCTGGATTTAGTGCTCAACAAAATCAGGAAAAATTATATCAACAGACTAATGTTCAAAATGGACGTCTTGCTCAACATTATATGAATTCTGTGCCAAATTCTGGATTTACTGCAGATTCTGCCATTCAAAATAGGACTTCTTACCAAGATTCAATTCCTCAGAATAGGACTTCTTACCAAGATTCAGTTCCTCAGAATAGGACTTCTTACCAAGATTCAGTTCCTCAGAATAGGACTTCTAATGCTAATCCAATGTTTCATAATAGGATTTCCCAACAAAATTTTATGCCTCAAAATAGACCTTCTCATCAGGAATCTACATTTCAAAGTGGGCCTTCTAATCCAAATTATATGTATCAAACTAGTACTTCCTCACAAAATAATGTACCTAACATGACAAACAATCGTCAAGTGAATACAGGTACAATACAAGGTCATCAGCAGTTAGTACAACCTTATCCACAGTATGTAACAAACAACCATCCTTCAGTGCCATATTCTTACGGACAGTCAATGCAACCACATGGGTATGCCCCTATGCCCAGTACACAAGGATTTATAGGTCAGTCACAATTGCCACCACAACATTTTACTACACAATATACTCAGCAAGCACCTGCTAATTATGTAACAGGTTATGATAGACCTCCAGCAGCAAATCATTGTCAGCCAAATCAACAGGGCATGATCAAAAACAGTCAACAACAGTTTGTACCCATTACATCACAGAATCAGCAAATACCTGTGTCTTCAAATAACAGTGTACAAAGAAATATTCATCAGGATCAACGACCTTCACCTCATGCTGATAGTAGTAAATCAAGTGACGACAGTGGTTTAAGTGTTACTCCAGAAAAACAAATGCCCCCTCCGAAACCTAACAGCAAAAATCCTGAAACAGAAGAAACACCTGATTCTATATTACACAGTAAAAATATCAACTGGAATCAAGTACCACAAGAAGTTTATCAGTTGTTAGTTCAACAAGATGCTCAACTCAAAAAATTACAGTCACAGATACAAATGTTGATTACTAATCAAAGTAACTCATCACAAAATACAACCACAACAGAACTTAATTCTCAAATGTCTTCTGTTAATAAACCAACACAGGACAGTAGGGTAGAAATGTGTTCTGTGGCAGTCAACACATCAATGTTTTATCCTCAACAGTCAAACCAGTCAGTCTCACAACAAACAAGCCCTCAGAAATCTGTATCAATACGATCTGATACATCATCTGGTGAGAATACACCACGTCAGGGCTCGCAGTGCAGTGGTGATGATGGGCGTACTCCTGCAGAGATACGGCACCGAGGCATTCTACCTTTCAACAGTACACATAAGGATGAATTTGACTTGGATGCATCCCAGGATCTGTCAAGTGTGGTGAACAACATGGCCCTCCATGACAAGACTATTGATAGTATCCAGTCTGATATGATAGTGGATATGCCTAGCTATCATTCCTCTCCTACAAGATCAGAAAAATCTGGAGACACTTTATCAAACTCTCAGGACACATTCACTAATTTCATGGATAAGAGTCCAACTAGTGCCAGTATGTGTGGTCAACAAGAAGATTCTGGGGATGAACATGACCAAGTAGATACTAATGATAAAGAATATTACGACAGATTGATGAACAACATACAGCTTCTGTTGAACCAGCAGAGTACTGAACAAGGGGAAGTAACTGATACTTTACAGAATGATACATTACAACAGAGTATAATGCTGGGCCAATCAGCAGGTGCTAGTGATAGTCCATTAGAGACTACATTTATACCAAAAATAAATTATATGTCAATGATGTTTGATTCAGACTCTGATTCCTCCATGGAAATAAATGCCATGGCAATGAAATACCTGAAGGATGAACAGCTTACACAGATGACCAAATTACAAACCAGGGCTAAGCTCACAGGTAATAATGGTCATCAACGTGTTGCCATGCTCCGCCATATTTTATCAGATGACAAAGAAGCTACACCAAATGTCACCACTGTTGGAATGTCTCCAAATGATATGACGTTCGCTACAAGAAAATATATGGAAAAACATGGATTAATAAACAATGATTCTAAAAATACTACAGCAGAGAGTAACAGTACTGGCAATGACAGTTATCAGTTACGACTGAATTATAGTACAATGTCATGTCGTTCTGAATCACCCGTACAAATAACTAGAGATGTTATCAATAATTTGGAAGATCACAAGGATAGTTATAAAACACCCACCAGACAGACTGTAGGAAGTAGACTCACAGGAAGTCCATTTATAAATAGTCAAAATGTAACTAATACTCCAAAAAACAGAACAAGTAGTCCTCCATTGAATAGTCATAATGTTACTAATAAAATAAATAGTCCTCATGTAAACTCACAAACAAAAAGTCCATATGTAAATAGTCAGACAAACAGTCCTTTTATTAACAGTCAAACAAAAAGTCCAGCTTTCAACAGTCGTAACATGTCAGATAAACATGGGAGAGGAAATTATCATTTTACTCCATCACCAGGGATACCATCACCACAACAACTGACAAGAGAGAGGCCAAAGGTGCTTGAGGAAAGACAGGAAGTGGTTCATCACAAAAATCCAACTGAAAACCAAAGAGAACACAACAACTCAGGAGATAATTACAGACCTTTTTTTCATGATGATGATGATGATAAAATATTAGATATAACAAGATTAAGAATGTTACCAAAACTTTTATAG

Transcript

Bpl_scaf_16621-20.40

TGTAGATGGAGAAGGTTTGATGTTGACTCTAGATAGATTTGATCCTGGTGGAGATTCTCTCAACAATAGTTACTCTCTGTCTCCAGGAGATTTGGCAGTTCCATTTCAAGTGATGTTAAATTCAAAGAATGAGAGACAAAGTTCATCAGATGATTACTTACAAGCTTTACATCTGTTAAAACAGAGGTGTAGCAGTAAGAGTTCTATAGACCTCAGTAATTTTCTCCTCACAAAAGGATGGTGTAATATATATACCAGTGGAGATAAATGTGTTCATCATTTAGAATTTGATGTTGTTACCATGGCAACAGAGTTCAAGGCCACTCCCATCACACCTGTTCCTATTGTTCCAACAGCTTTATCTAAAAACCTGTCTGGACCTATGAGTATGAGCCATTTACAAGGCGAACCAAAAACAGGTTGGGTGAGTGGTATATCATTTGTATACAGTCCATACATATGGGCATGCTGTCTCAGATTTCTACATAATGCAACTCTAAATGACAGAGTTTGTGTTCCACCCGAATCATTCTTATTGGTGCTATATAATCCAATGCATTCCAAACCTGAGTTTTATGAAATCATTACCTCAACTGGAAATGGTCAGATGAACTTTGAACTCTTTAATGGATATGAGACAATAACTAGTAGTAGTAGGTCAATAGAAATGGACATTGGTGCTGTAGAAGGTGGACAAAAGAAAGAACAATTTGATGGTGCTATACATTTGCTCAAAACTCAAAAAACTAACAGTCATGATGATGTGTCTGTGTCAACACCTGTATCTACAGCTGATGAAATGACACCTAGAAACATGCCAGCTCCTCACAGATCTCAGCTGCCAGTGATGACTTCTATGGTACCTGAGGTCAGTTTATTGTTTGGTGAAGATTCGGGCATGTTTGTTAACCCAAAGAAACCCACGATCACTCAGGGAAAACCTAATGGTGTTGCTCACACGTCAGATTTCAGACCAAAATTGCCAGTGCTACATGAACAACCAAATGTTCAACAATCGAAAAGTTCTTCTGGATTTAGTGCTCAACAAAATCAGGAAAAATTATATCAACAGACTAATGTTCAAAATGGACGTCTTGCTCAACATTATATGAATTCTGTGCCAAATTCTGGATTTACTGCAGATTCTGCCATTCAAAATAGGACTTCTTACCAAGATTCAATTCCTCAGAATAGGACTTCTTACCAAGATTCAGTTCCTCAGAATAGGACTTCTTACCAAGATTCAGTTCCTCAGAATAGGACTTCTAATGCTAATCCAATGTTTCATAATAGGATTTCCCAACAAAATTTTATGCCTCAAAATAGACCTTCTCATCAGGAATCTACATTTCAAAGTGGGCCTTCTAATCCAAATTATATGTATCAAACTAGTACTTCCTCACAAAATAATGTACCTAACATGACAAACAATCGTCAAGTGAATACAGGTACAATACAAGGTCATCAGCAGTTAGTACAACCTTATCCACAGTATGTAACAAACAACCATCCTTCAGTGCCATATTCTTACGGACAGTCAATGCAACCACATGGGTATGCCCCTATGCCCAGTACACAAGGATTTATAGGTCAGTCACAATTGCCACCACAACATTTTACTACACAATATACTCAGCAAGCACCTGCTAATTATGTAACAGGTTATGATAGACCTCCAGCAGCAAATCATTGTCAGCCAAATCAACAGGGCATGATCAAAAACAGTCAACAACAGTTTGTACCCATTACATCACAGAATCAGCAAATACCTGTGTCTTCAAATAACAGTGTACAAAGAAATATTCATCAGGATCAACGACCTTCACCTCATGCTGATAGTAGTAAATCAAGTGACGACAGTGGTTTAAGTGTTACTCCAGAAAAACAAATGCCCCCTCCGAAACCTAACAGCAAAAATCCTGAAACAGAAGAAACACCTGATTCTATATTACACAGTAAAAATATCAACTGGAATCAAGTACCACAAGAAGTTTATCAGTTGTTAGTTCAACAAGATGCTCAACTCAAAAAATTACAGTCACAGATACAAATGTTGATTACTAATCAAAGTAACTCATCACAAAATACAACCACAACAGAACTTAATTCTCAAATGTCTTCTGTTAATAAACCAACACAGGACAGTAGGGTAGAAATGTGTTCTGTGGCAGTCAACACATCAATGTTTTATCCTCAACAGTCAAACCAGTCAGTCTCACAACAAACAAGCCCTCAGAAATCTGTATCAATACGATCTGATACATCATCTGGTGAGAATACACCACGTCAGGGCTCGCAGTGCAGTGGTGATGATGGGCGTACTCCTGCAGAGATACGGCACCGAGGCATTCTACCTTTCAACAGTACACATAAGGATGAATTTGACTTGGATGCATCCCAGGATCTGTCAAGTGTGGTGAACAACATGGCCCTCCATGACAAGACTATTGATAGTATCCAGTCTGATATGATAGTGGATATGCCTAGCTATCATTCCTCTCCTACAAGATCAGAAAAATCTGGAGACACTTTATCAAACTCTCAGGACACATTCACTAATTTCATGGATAAGAGTCCAACTAGTGCCAGTATGTGTGGTCAACAAGAAGATTCTGGGGATGAACATGACCAAGTAGATACTAATGATAAAGAATATTACGACAGATTGATGAACAACATACAGCTTCTGTTGAACCAGCAGAGTACTGAACAAGGGGAAGTAACTGATACTTTACAGAATGATACATTACAACAGAGTATAATGCTGGGCCAATCAGCAGGTGCTAGTGATAGTCCATTAGAGACTACATTTATACCAAAAATAAATTATATGTCAATGATGTTTGATTCAGACTCTGATTCCTCCATGGAAATAAATGCCATGGCAATGAAATACCTGAAGGATGAACAGCTTACACAGATGACCAAATTACAAACCAGGGCTAAGCTCACAGGTAATAATGGTCATCAACGTGTTGCCATGCTCCGCCATATTTTATCAGATGACAAAGAAGCTACACCAAATGTCACCACTGTTGGAATGTCTCCAAATGATATGACGTTCGCTACAAGAAAATATATGGAAAAACATGGATTAATAAACAATGATTCTAAAAATACTACAGCAGAGAGTAACAGTACTGGCAATGACAGTTATCAGTTACGACTGAATTATAGTACAATGTCATGTCGTTCTGAATCACCCGTACAAATAACTAGAGATGTTATCAATAATTTGGAAGATCACAAGGATAGTTATAAAACACCCACCAGACAGACTGTAGGAAGTAGACTCACAGGAAGTCCATTTATAAATAGTCAAAATGTAACTAATACTCCAAAAAACAGAACAAGTAGTCCTCCATTGAATAGTCATAATGTTACTAATAAAATAAATAGTCCTCATGTAAACTCACAAACAAAAAGTCCATATGTAAATAGTCAGACAAACAGTCCTTTTATTAACAGTCAAACAAAAAGTCCAGCTTTCAACAGTCGTAACATGTCAGATAAACATGGGAGAGGAAATTATCATTTTACTCCATCACCAGGGATACCATCACCACAACAACTGACAAGAGAGAGGCCAAAGGTGCTTGAGGAAAGACAGGAAGTGGTTCATCACAAAAATCCAACTGAAAACCAAAGAGAACACAACAACTCAGGAGATAATTACAGACCTTTTTTTCATGATGATGATGATGATAAAATATTAGATATAACAAGATTAAGAATGTTACCAAAACTTTTATAGCAAAATACGAGAATCCATGTCAGAATTTCACAGCAATTATTTTTATTTTCTATTTATTTTTAAAAGGGCATATTCATGAGTTTATTATCTTTTTATATAATCTGACACAAAGTGAGATTAGTTGTTGTCATTACTTGGCATCTGTCGGTCAAAACCTAAGCCTTTCACATTTCAATCTCCTCCGAAATCATCAATCATTAAAATATTTTCAACCTAAACTTTGCAGCAATGATGTTTGTGAGATTCCTTACAAAAATTCCTCTGTTTTGTCCTGATCCTTCAAATAATTTCCGATGAGTCGAATCATTAAAAAAATCTTTTCTGAAAGTCCACAAATGATTTTTGAGTTAGTTCTAATGATGTTTGTGAGGTCCTCTACAAATATTCCTTATTTTATTTTGATTGAGTGAAAACATTACTCATACTGCAATGGGCAATTCTTGGTTTTGATTTGCTGACACTTTAAAAATCTCCTTTTGATGCTTTTAAGTCCCATTGATTTGTATGCTGGACTTTTTTTTAAATTTTCTACTCTGAATGAATGTTTTGATACTTAGTACAAATGATGTTTGTCATGTCTTTTACAAAGATTTCTCATTTTATCATGATCAGGCAAAAATAGTTTTCAAAATGAGTGGTTTTAGAGTTATTTGCAAACCAGATGAGTGATACAAGTTCCTAGGACCATCTGTTTTACTGATTTTAATATTATGGAGTGGACAAAATCTTTTTATTTGATCTGTGATACAATTTTAAAGTATTGAATTCTTTAGTTCTGCTATTAGAACTATATGTAAATTTGTGAAAAAGCACTTGTTGTGTACAAATCAAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15253	STIL_N	SCL-interrupting locus protein N-terminus	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026123	Family	SCL-interrupting locus protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15128	TAL1 SCL INTERRUPTING LOCUS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005813	Cellular Component	centrosome	Interproscan
GO:0005814	Cellular Component	centriole	Interproscan
GO:0007052	Biological Process	mitotic spindle organization	Interproscan
GO:0007224	Biological Process	smoothened signaling pathway	Interproscan
GO:0051298	Biological Process	centrosome duplication	Interproscan
GO:0071539	Biological Process	protein localization to centrosome	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16724	STIL; SCL-interrupting locus protein	-	Chromosome and associated proteins	ko03036	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_16621-20.40 global RNA-seq network