Detailed information of Bpl_scaf_16143-21.9 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_16143-21.9NUCLEOPORIN P54Bpl_scaf_1614321272212157295-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13874Nup54Nucleoporin complex subunit 54DomainInterproscan
PF18437Nup54_CNup54 C-terminal interacting domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR024864FamilyNucleoporin Nup54/Nup57/Nup44Interproscan
IPR025712DomainNucleoporin Nup54, alpha-helical domainInterproscan
IPR040985DomainNup54, C-terminal interacting domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13000NUCLEOPORIN P54Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005643Cellular Componentnuclear poreInterproscan
GO:0006607Biological ProcessNLS-bearing protein import into nucleusInterproscan
GO:0006999Biological Processnuclear pore organizationInterproscan
GO:0017056Molecular Functionstructural constituent of nuclear poreInterproscan
GO:0036228Biological Processprotein localization to nuclear inner membraneInterproscan
GO:0044613Cellular Componentnuclear pore central transport channelInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14308NUP54, NUP57; nuclear pore complex protein Nup54-RNA transport ko03013PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_16143-21.9 global RNA-seq network
TOP