Gene detail

Detailed information of Bpl_scaf_15663-0.9 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_15663-0.9	BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER	Bpl_scaf_15663	7022	12634	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_15663-0.9

ATGGACAAATATGTGTCTATGTTGATTGATACGGGTGCAAATATTACGATTTTGAGCACGAAATTGTTGAACAGTTGGGATCCTTCATCTCGACCAGAAATTGAACCTGTCAAAATGAATTTGTTGACAGCTACGGGTGAAAGTTCACCTTTCTATGGGAAAACCAAGTTACAGTTAGAAATAGGAAAAAGATCCTACGAACATGAGTTTTTGCTAACTGATATTAAAGATAACGGTATTTTGGGTATGGACTTCTTAACGAAGTATAAATGTGATTTAATGTTAAGTAAAGGTTATATCTTGCTTAACAAAGAAAGAATACCTTGTATTACCGGTCAAAGTGACAAACAGAATATATGTTGTAGAATTAGCACCCAAGAAAATATTATTATACCCCCTGAATCAGAGATGATAATTTCTGGTAAGATAATTGATGGGATTCAGATGGATGCATCTGGAATTGTAGAACAAAACAAGAGTTTTGTTGATAAAAGTGGAGTATTAGTGGCAAAAGCTGTCATTGATTTAAACAGTGGGGTCATTCCAATTAGAATGATTAATATCAATACGGAACCGTACAAAATACATAAAAACACAGTTGTAGCTATGTTTGAAACTGTGGATAATATCGAAATGAAAGACGAACAGGAAGCCGAATCGGAGGTACATCTACATAGGTCTTCATTTAGTGATAACCGTTTTCGTCAGGAAGGGGCCACGGAAGCTGGTCTTCGTTCCTCCCATGAGGAACACAAAACAGAAGAGGTTACCTCCCGTGAGGAACCTATATCCGCACTGCAGGATATCAGTGGAAGCGTTCAGGGGTTCTCTGGAGAGAAAACAAACTCCTCCCGTGAGGAGCTGAACAACGGGAAAAGGGTGTCTCAATACAAACATGAGCATAGAGAAGACGAAGGTTCAAGTAAAAATCCAGTAAAACTGGCGAATGTTGAAACAAGTAATATTCCTGTTAATGTGGTAACAAGAAATGTGGCCAACAATAATGGCAAAGTAGTAAATGAAAGGTTCGTGAGTGAAGTAGATTGTAAAGAAATCACTTCAGCAAATATAGATGAATTACAGGAAAATGATCCTGATATCAAGCAAACGGGACAGACCGGTACGGGGATCCGTGAATACTACCTAAAAATCAAGACAGAGGAGATCGAGAAACACATTCAACCCGTGTACAGAGAAGTTCAAAATCAACCGAAGAAAGAAACTGGACCAAGAATTGCGCCATATATCCCGACCGCCCGGGGCCGCTCACCGGTAAGAAGGGCTAGCGGTACCCCCAGGAGCAAGTCAATGTCCCCAGCAAAGCGGCAGAGGAGGGAATCAGTTTCACCAGATGGCAGTAGCAAATCAAAGGTACGTTCCATGGTTGTGAAAGTAGAGAAGCCGGCGGCAGAGGGGAAGGCACCCAGGGCCCGTAGTCAATCTGTCGAGAATGACAAAGGACGGGACAGTAGGGTGCCTTCCAATCAACACAATGAGAGGGACAGATCCTCCTCAACGTCCAGTAGCAGCTCATCCAGTTCATCCTCGTCCTCGTCGACGGTTGTGTCGGATGTATCACTCCATGCCGATCAACAGCCGGGGGCGGGGACCGCGATGGAAGAAGCAGGAGCAAGCGGCGGAGATGTCGTGTCCCAGAATTTAGAACATCTTAAATTGTGTAGTGACAGTAAGATTGTATTAAATATTGGGGGCACGAAATTTGAAACATCAAGGAAAACGCTTACGGTCGTGCCACAGAGTCTATTCGAAAGGATGGTGGAAACAACAACATTCCCGGTAAGTGCAGGGGGGGGGGTCTATTTCATAGATAGAGACCCCACTTACTTCAGGCTAATACTGAACTATTTGAGAAATGTAGAAGAGTTTGGAAAGAACATTTTACCCAAAGATGTGAGATATATTGAGGAATTAAAACTGGAGGCCGAATTCTATCAGCTAAGTAACTTTAAGAGATTTCTAAGCTTAAGGATGGAACAATTACAGTCAATTGGAAGTGAAATAACTGTAAATTGA

Transcript

Bpl_scaf_15663-0.9

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|BTB

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02214	BTB_2	BTB/POZ domain	Domain	Interproscan
PF13975	gag-asp_proteas	gag-polyprotein putative aspartyl protease	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000210	Domain	BTB/POZ domain	Interproscan
IPR001969	Active_site	Aspartic peptidase, active site	Interproscan
IPR001995	Domain	Peptidase A2A, retrovirus, catalytic	Interproscan
IPR003131	Domain	Potassium channel tetramerisation-type BTB domain	Interproscan
IPR011333	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR036157	Homologous_superfamily	dUTPase-like superfamily	Interproscan
IPR045068	Family	BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1/2/3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11145	BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0051260	Biological Process	protein homooligomerization	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_15663-0.9 global RNA-seq network