| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_15606-0.21 | RBP-RELATED | Bpl_scaf_15606 | 56254 | 103849 | + |
| CDS | |||||
| Bpl_scaf_15606-0.21 | |||||
| Transcript |
| Bpl_scaf_15606-0.21 |
| Protein |
| Bpl_scaf_15606-0.21 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | ARID |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01388 | ARID | ARID/BRIGHT DNA binding domain | Domain | Interproscan |
| PF08169 | RBB1NT | RBB1NT (NUC162) domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001606 | Domain | ARID DNA-binding domain | Interproscan |
| IPR012603 | Domain | ARID4A/B, PWWP domain | Interproscan |
| IPR036431 | Homologous_superfamily | ARID DNA-binding domain superfamily | Interproscan |
| IPR051232 | Family | AT-rich Interactive Domain/SWI1 Chromatin Remodeling | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13964 | RBP-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000976 | Molecular Function | transcription cis-regulatory region binding | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K19195 | ARID4B; AT-rich interactive domain-containing protein 4B | - | Transcription factors | ko03000 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_15606-0.21 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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