| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_15294-6.19 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN | Bpl_scaf_15294 | 487645 | 592317 | - |
| CDS | |||||
| Bpl_scaf_15294-6.19 | |||||
| Transcript |
| Bpl_scaf_15294-6.19 |
| Protein |
| Bpl_scaf_15294-6.19 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|SH3 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00307 | CH | Calponin homology (CH) domain | Domain | Interproscan |
| PF00435 | Spectrin | Spectrin repeat | Domain | Interproscan |
| PF14604 | SH3_9 | Variant SH3 domain | Domain | Interproscan |
| PF15410 | PH_9 | Pleckstrin homology domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001452 | Domain | SH3 domain | Interproscan |
| IPR001605 | Domain | Pleckstrin homology domain, spectrin-type | Interproscan |
| IPR001715 | Domain | Calponin homology domain | Interproscan |
| IPR001849 | Domain | Pleckstrin homology domain | Interproscan |
| IPR002017 | Repeat | Spectrin repeat | Interproscan |
| IPR011993 | Homologous_superfamily | PH-like domain superfamily | Interproscan |
| IPR018159 | Repeat | Spectrin/alpha-actinin | Interproscan |
| IPR036028 | Homologous_superfamily | SH3-like domain superfamily | Interproscan |
| IPR036872 | Homologous_superfamily | CH domain superfamily | Interproscan |
| IPR041681 | Domain | Pleckstrin homology domain 9 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11915 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005543 | Molecular Function | phospholipid binding | Interproscan |
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0030036 | Biological Process | actin cytoskeleton organization | Interproscan |
| GO:0030054 | Cellular Component | cell junction | Interproscan |
| GO:0030864 | Cellular Component | cortical actin cytoskeleton | Interproscan |
| GO:0042995 | Cellular Component | cell projection | Interproscan |
| GO:0051015 | Molecular Function | actin filament binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K06115 | SPTBN1_4_5; spectrin beta, non-erythrocytic 1/4/5 | - | Cytoskeleton in muscle cells | ko04820 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_15294-6.19 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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