Detailed information of Bpl_scaf_15294-6.18 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_15294-6.18SERUM RESPONSE FACTOR HOMOLOGBpl_scaf_15294643044654642-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilySRF

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00319SRF-TFSRF-type transcription factor (DNA-binding and dimerisation domain)DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002100DomainTranscription factor, MADS-boxInterproscan
IPR033897DomainMADS SRF-likeInterproscan
IPR036879Homologous_superfamilyTranscription factor, MADS-box superfamilyInterproscan
IPR050142FamilyMADS-box/MEF2 Transcription FactorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR48019SERUM RESPONSE FACTOR HOMOLOGInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0000987Molecular Functioncis-regulatory region sequence-specific DNA bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04378SRF; serum response factor-MAPK signaling pathway ko04010PMID: 28812709
cGMP - PKG signaling pathway ko04022PMID: 28812709
Viral carcinogenesis ko05203PMID: 28812709
HTLV-I infection ko05166PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_15294-6.18 global RNA-seq network
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