Detailed information of Bpl_scaf_14919-4.12 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_14919-4.12E3 UBIQUITIN-PROTEIN LIGASE TTC3Bpl_scaf_14919362938416246+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF13639zf-RING_2Ring finger domainDomainInterproscan
PF19179TTC3_DZIP3_domE3 ubiquitin-protein ligase TTC3/DZIP3 domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR043866DomainE3 ubiquitin-protein ligase TTC3/DZIP3 domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR17550E3 UBIQUITIN-PROTEIN LIGASE TTC3Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15712TTC3; E3 ubiquitin-protein ligase TTC3EC:2.3.2.27
Ubiquitin systemko04121PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_14919-4.12 global RNA-seq network
TOP