Detailed information of Bpl_scaf_13807-2.8 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_13807-2.8CELL DIVISION CYCLE 5-LIKE PROTEINBpl_scaf_13807216064256105+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11831Myb_Cefpre-mRNA splicing factor componentFamilyInterproscan
PF13921Myb_DNA-bind_6Myb-like DNA-binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001005DomainSANT/Myb domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017930DomainMyb domainInterproscan
IPR021786DomainPre-mRNA splicing factor component Cdc5p/Cef1, C-terminalInterproscan
IPR047240DomainPre-mRNA splicing factor component CDC5L/Cef1, second SANT/myb-like domainInterproscan
IPR047242FamilyPre-mRNA splicing factor component CDC5L/Cef1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR45885CELL DIVISION CYCLE 5-LIKE PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0000974Cellular ComponentPrp19 complexInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12860CDC5L, CDC5, CEF1; pre-mRNA-splicing factor CDC5/CEF1-Spliceosome ko03040PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_13807-2.8 global RNA-seq network
TOP