Gene detail

Detailed information of Bpl_scaf_13236-9.4 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_13236-9.4	SER/THR PROTEIN KINASE-TRB	Bpl_scaf_13236	953145	977110	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_13236-9.4

ATAAAAAACAAGAACTTTCATTTAGCATGGAAAAAACTTAAACAAATTGAATTTATTCAACCATTATTGAAGTATCAGAATCATACACAATGGATAACGACAGAACACAGATATGATGGAATTATATGATGAAAAGGTCCTTAGGAGTTTCCTCCTTAAACCAGCCATCAAGTAGCAAGGTCCAGAGAATACATCCACCATCTCCAGAAGTCAGGAAAGCTGGACCTTATTTACTAGGACCAAGACAAGGATCTTCACCAGTCAGAAGTATTGTACAGTGTTTAGCTAGAAAAGATGGCACAGATAATTTCTATACTATCAAGATTTTGACCCTATCTGACCCTAATGAGGAGACACAGGATGACAGACAAGGCAAGATGTTATTACATACAGAATATTCTTTATTATCATTGCTTCACAACCAAGATGGAGTTGTACATCACCATGGACTTTTTAAGGATGAAGCTTTAGAAGATAAAGAAATTTCAAGGCTTTATCCTGGCCATCCAATACCTAGAAAAAGGAAGCGACTGTGTCTTGTTTTAGACTGTTTAGTACACCATGACTTCAGTACAGATAACCAAGACTTAGTCAATCTACAACACTATGTTATTAAAGAGAAGAAATTATCAGAGAAGGAAGCTATTGTTATATTTATAGACATTGTCAGGGTTGTAGAAAGTCTTCATCAGAAAAATTTAGTACATCGTGATCTAAAGCTTGGGAACATGGTATTGAACAAGAGAACAAAAAGGATAACCATTACAAATTTCTGTCTTGGCAAACTTCTGGTGTCTGAGGCTGATCCATTGAAGGATCAGAGAGGTAGTCCTGCCTATATCAGTCCTGATGTTTTAAGTGGTAAACCGTATCTAGGCAAGCCAAGTGATATGTGGGCATTAGGAGTTGTACTGTTTACAATGTTATATGGACAATTCCCTTTCTATGACAGCCAACCTCAGGAATTATTTAGAAAGATTAAAGCAGCAGAATTTACTGTACCAAGTGATGGGAGAGTATCTGAAGATTCTAAATATATCATACAAAACCTTTTGATCTTGAACTCTAAGAAACGTCTGACAGCATCAGAAGTGATGGACTATTTACATTCTCTTGTTGCTAAATGGAGAGCTATGTCAAGTCTAAGTGGACCATTACAAGTCGTTCCTGACATTGATGACAAGTATATTCATGACAATAAGAATGATAACGATGAGAGTTCAGCTGTACTTTTATCAGACATTCCACCTATGGATCGAGATGAACAGACGACAACAGCCATCACAGAACTTGCTCACGCCGTGACCTCTTCAGATAGTGATGGACAAAGCAGAGACAACAAAGAAAAAGCTACCAGACGAAGACATACATCAGCTCATCCACCAATACATAGGATGAATGATGATGCTCAACCTCTTACTCCTACGGAGTTGATGGCTCATAGACAGCTGTTGTCACAACACCAGTCATAAATATGTCATCATCTTACTCCTACTGAGTTAATGGCTCATAGACAGTTGTTGTCACCACACCAGTCATAAATATGTCATCATCTTACTCCTACTGAGTTAATGGCTCATAGACAGCTGTTGTCACAACACCAGTCATAAATATGTCATCATCTTACTCCTACTGAGTTAATGGCTCATAAACAGCTGTTGTCACAACACCAGTCATAAATATGTCATCATCTTACTCCTACTGAGTTAATGGCTCATAGACAGCTGTTGTCACAACACCAGTCATAAATATGTCGTCATCTTAGTCATATCGAGTTGATGGCTCATAGACCACTGTTGTCACAACACCAGTCATAACTATGTCATATAAATTTGCAGACACTATCCATTTATTAAGTCAAATTTAATCTCAGTCTTCCTTTAAGAAATATCAATCATATCTGGTAGAATAAAGATTTCCATCTTTGATCTTTGAACTACATCATTTCTTTTGATGAATTTATTTGGACCAATATTTGTCTGAAGAATGATAAAACTCAATGCAGCTTTCATAAGAATCATGTGACTTATTTTCATAAGAATCATGTAACAGTCATAAAGCTTTCGAGTAGAAGTTTTGTACTCATACTCCAAAATGGTCCAATCAGGATGCTTTATTTTTTGGATACGACATTCTGATTGGATGTTTTTCGAATAAGAGTACAAAACCCATGCTCATAATTTTATGAACTTATAAAGCCAGATATCTACCTGTACTTTTTCTTTCTCAGGAATCTTTGATAAAATATTGTTTTAAAT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR024104	Family	Pseudokinase tribbles family/serine-threonine-protein kinase 40	Interproscan
IPR024236	Family	Serine/threonine-protein kinase 40	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22961	SER/THR PROTEIN KINASE-TRB	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16312	STK40, SHIK; serine/threonine-protein kinase 40	EC:2.7.11.1	Protein kinases	ko01001	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_13236-9.4 global RNA-seq network