| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_12168-1.10 | DYSTROGLYCAN-RELATED | Bpl_scaf_12168 | 73885 | 91655 | + |
| CDS | |||||
| Bpl_scaf_12168-1.10 | |||||
| Transcript |
| Bpl_scaf_12168-1.10 |
| Protein |
| Bpl_scaf_12168-1.10 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05345 | He_PIG | Putative Ig domain | Domain | Interproscan |
| PF05454 | DAG1 | Dystroglycan (Dystrophin-associated glycoprotein 1) | Family | Interproscan |
| PF18424 | a_DG1_N2 | Alpha-Dystroglycan N-terminal domain 2 | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006644 | Domain | Dystroglycan-type cadherin-like | Interproscan |
| IPR008465 | Domain | Dystroglycan, C-terminal | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR015919 | Homologous_superfamily | Cadherin-like superfamily | Interproscan |
| IPR027468 | Homologous_superfamily | Alpha-dystroglycan domain 2 | Interproscan |
| IPR030398 | Domain | DG-type SEA domain | Interproscan |
| IPR041631 | Domain | Alpha-dystroglycan N-terminal domain 2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21559 | DYSTROGLYCAN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0002009 | Biological Process | morphogenesis of an epithelium | Interproscan |
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0007411 | Biological Process | axon guidance | Interproscan |
| GO:0016010 | Cellular Component | dystrophin-associated glycoprotein complex | Interproscan |
| GO:0016011 | Cellular Component | dystroglycan complex | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0016203 | Biological Process | muscle attachment | Interproscan |
| GO:0021675 | Biological Process | nerve development | Interproscan |
| GO:0042383 | Cellular Component | sarcolemma | Interproscan |
| GO:0043236 | Molecular Function | laminin binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K06265 | DAG1; dystroglycan 1 | - | ECM-receptor interaction | ko04512 | PMID: 28812709 |
| Hypertrophic cardiomyopathy (HCM) | ko05410 | PMID: 28812709 | |||
| Arrhythmogenic right ventricular cardiomyopathy (ARVC) | ko05412 | PMID: 28812709 | |||
| Dilated cardiomyopathy (DCM) | ko05414 | PMID: 28812709 | |||
| Viral myocarditis | ko05416 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_12168-1.10 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
