| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_10772-5.8 | TRANSCRIPTION FACTOR E2F | Bpl_scaf_10772 | 541655 | 566885 | + |
| CDS | |||||
| Bpl_scaf_10772-5.8 | |||||
| Transcript |
| Bpl_scaf_10772-5.8 |
| Protein |
| Bpl_scaf_10772-5.8 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | E2F |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02319 | E2F_TDP | E2F/DP family winged-helix DNA-binding domain | Domain | Interproscan |
| PF16421 | E2F_CC-MB | E2F transcription factor CC-MB domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003316 | Domain | E2F/DP family, winged-helix DNA-binding domain | Interproscan |
| IPR015633 | Family | E2F Family | Interproscan |
| IPR032198 | Domain | E2F transcription factor, CC-MB domain | Interproscan |
| IPR036388 | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR036390 | Homologous_superfamily | Winged helix DNA-binding domain superfamily | Interproscan |
| IPR037241 | Homologous_superfamily | E2F-DP heterodimerization region | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12081 | TRANSCRIPTION FACTOR E2F | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000978 | Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Interproscan |
| GO:0000981 | Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | Interproscan |
| GO:0005667 | Cellular Component | transcription regulator complex | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0046983 | Molecular Function | protein dimerization activity | Interproscan |
| GO:0090575 | Cellular Component | RNA polymerase II transcription regulator complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K04682 | E2F4_5; transcription factor E2F4/5 | - | TGF-beta signaling pathway | ko04350 | PMID: 28812709 |
| Cell cycle | ko04110 | PMID: 28812709 | |||
| Cellular senescence | ko04218 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_10772-5.8 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
