| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_10772-2.18 | UBIQUITIN | Bpl_scaf_10772 | 277711 | 284776 | + |
| CDS | |||||
| Bpl_scaf_10772-2.18 | |||||
| Transcript |
| Bpl_scaf_10772-2.18 |
| Protein |
| Bpl_scaf_10772-2.18 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | ULD|UBL|NEDD8 |
| Ubiquitin Family | ULD|UFD/UBQ|UBQ_Other |
| Ubiquitin Family | ULD|UFD/UBQ|UBQ_PIM |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00240 | ubiquitin | Ubiquitin family | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000626 | Domain | Ubiquitin-like domain | Interproscan |
| IPR019954 | Conserved_site | Ubiquitin conserved site | Interproscan |
| IPR019956 | Domain | Ubiquitin domain | Interproscan |
| IPR029071 | Homologous_superfamily | Ubiquitin-like domain superfamily | Interproscan |
| IPR038738 | Domain | Nedd8-like ubiquitin | Interproscan |
| IPR050158 | Family | Ubiquitin and ubiquitin-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10666 | UBIQUITIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0019941 | Biological Process | modification-dependent protein catabolic process | Interproscan |
| GO:0030162 | Biological Process | regulation of proteolysis | Interproscan |
| GO:0031386 | Molecular Function | protein tag activity | Interproscan |
| GO:0031625 | Molecular Function | ubiquitin protein ligase binding | Interproscan |
| GO:0045116 | Biological Process | protein neddylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K12158 | NEDD8; ubiquitin-like protein Nedd8 | - | Ubiquitin system | ko04121 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_10772-2.18 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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