| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_10487-2.12 | CYCLINS | Bpl_scaf_10487 | 269750 | 288042 | + |
| CDS | |||||
| Bpl_scaf_10487-2.12 | |||||
| Transcript |
| Bpl_scaf_10487-2.12 |
| Protein |
| Bpl_scaf_10487-2.12 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00134 | Cyclin_N | Cyclin, N-terminal domain | Domain | Interproscan |
| PF02984 | Cyclin_C | Cyclin, C-terminal domain | Domain | Interproscan |
| PF16500 | Cyclin_N2 | Cyclin-A N-terminal APC/C binding region | Disordered | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR004367 | Domain | Cyclin, C-terminal domain | Interproscan |
| IPR006671 | Domain | Cyclin, N-terminal | Interproscan |
| IPR013763 | Domain | Cyclin-like domain | Interproscan |
| IPR032447 | Domain | Cyclin-A, N-terminal APC/C binding region | Interproscan |
| IPR036915 | Homologous_superfamily | Cyclin-like superfamily | Interproscan |
| IPR039361 | Family | Cyclin | Interproscan |
| IPR046965 | Family | Cyclin A/B-like | Interproscan |
| IPR048258 | Conserved_site | Cyclins, cyclin-box | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10177 | CYCLINS | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000079 | Biological Process | regulation of cyclin-dependent protein serine/threonine kinase activity | Interproscan |
| GO:0000307 | Cellular Component | cyclin-dependent protein kinase holoenzyme complex | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0016538 | Molecular Function | cyclin-dependent protein serine/threonine kinase regulator activity | Interproscan |
| GO:0044772 | Biological Process | mitotic cell cycle phase transition | Interproscan |
| GO:0097124 | Cellular Component | cyclin A2-CDK2 complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K06627 | CCNA; cyclin-A | - | AMPK signaling pathway | ko04152 | PMID: 28812709 |
| Cell cycle | ko04110 | PMID: 28812709 | |||
| Cellular senescence | ko04218 | PMID: 28812709 | |||
| Progesterone-mediated oocyte maturation | ko04914 | PMID: 28812709 | |||
| Viral carcinogenesis | ko05203 | PMID: 28812709 | |||
| Hepatitis B | ko05161 | PMID: 28812709 | |||
| Epstein-Barr virus infection | ko05169 | PMID: 28812709 | |||
| Human papillomavirus infection | ko05165 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_10487-2.12 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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