Detailed information of Bpl_scaf_10351-0.0 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_10351-0.0U3 SMALL NUCLEOLAR RNA U3 SNORNA ASSOCIATED PROTEINBpl_scaf_103511275118686+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR011047Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR051733FamilyWD repeat-containing DCAF13/WDSOF1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR22851U3 SMALL NUCLEOLAR RNA U3 SNORNA ASSOCIATED PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000462Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11806DCAF13, WDSOF1; DDB1- and CUL4-associated factor 13-Ribosome biogenesisko03009PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_10351-0.0 global RNA-seq network
TOP