| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_10298-1.19 | PRE-MRNA-SPLICING FACTOR ISY1 | Bpl_scaf_10298 | 96471 | 110532 | - |
| CDS | |||||
| Bpl_scaf_10298-1.19 | |||||
| Transcript |
| Bpl_scaf_10298-1.19 |
| Protein |
| Bpl_scaf_10298-1.19 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF06246 | Isy1 | Isy1-like splicing family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR009360 | Family | Pre-mRNA-splicing factor Isy1 | Interproscan |
| IPR029012 | Homologous_superfamily | Helix hairpin bin domain superfamily | Interproscan |
| IPR037200 | Homologous_superfamily | Pre-mRNA-splicing factor Isy1 superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13021 | PRE-MRNA-SPLICING FACTOR ISY1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000350 | Biological Process | generation of catalytic spliceosome for second transesterification step | Interproscan |
| GO:0000389 | Biological Process | mRNA 3'-splice site recognition | Interproscan |
| GO:0000974 | Cellular Component | Prp19 complex | Interproscan |
| GO:0071013 | Cellular Component | catalytic step 2 spliceosome | Interproscan |
| GO:0071014 | Cellular Component | post-mRNA release spliceosomal complex | Interproscan |
| GO:0071020 | Cellular Component | post-spliceosomal complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K12870 | ISY1; pre-mRNA-splicing factor ISY1 | - | Spliceosome | ko03040 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_10298-1.19 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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