| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_10298-1.10 | U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 | Bpl_scaf_10298 | 110503 | 124411 | + |
| CDS | |||||
| Bpl_scaf_10298-1.10 | |||||
| Transcript |
| Bpl_scaf_10298-1.10 |
| Protein |
| Bpl_scaf_10298-1.10 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04427 | Brix | Brix domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007109 | Domain | Brix domain | Interproscan |
| IPR044281 | Family | U3 snoRNP protein/Ribosome production factor 1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22734 | U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005730 | Cellular Component | nucleolus | Interproscan |
| GO:0006364 | Biological Process | rRNA processing | Interproscan |
| GO:0019843 | Molecular Function | rRNA binding | Interproscan |
| GO:0030515 | Molecular Function | snoRNA binding | Interproscan |
| GO:0032040 | Cellular Component | small-subunit processome | Interproscan |
| GO:0034457 | Cellular Component | Mpp10 complex | Interproscan |
| GO:0042134 | Molecular Function | rRNA primary transcript binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14561 | IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 | - | Ribosome biogenesis in eukaryotes | ko03008 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_10298-1.10 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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