Detailed information of Bpl_scaf_10277-8.9 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_10277-8.9NUCLEAR HORMONE RECEPTORBpl_scaf_10277775644806441+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyESR-like
Transcription Factors FamilyMiscellaneous
Transcription Factors FamilyMiscellaneous
Transcription Factors FamilyNGFIB-like
Transcription Factors FamilyRXR-like
Transcription Factors FamilySF-like
Transcription Factors FamilyTHR-like
Transcription Factors FamilyGCNF-like

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00104Hormone_recepLigand-binding domain of nuclear hormone receptorDomainInterproscan
PF00105zf-C4Zinc finger, C4 type (two domains)DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000003FamilyRetinoid X receptor/HNF4Interproscan
IPR000536DomainNuclear hormone receptor, ligand-binding domainInterproscan
IPR001628DomainZinc finger, nuclear hormone receptor-typeInterproscan
IPR001723FamilyNuclear hormone receptorInterproscan
IPR013088Homologous_superfamilyZinc finger, NHR/GATA-typeInterproscan
IPR035500Homologous_superfamilyNuclear hormone receptor-like domain superfamilyInterproscan
IPR050274FamilyNuclear hormone receptor family NR2 subfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24083NUCLEAR HORMONE RECEPTORInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0003707Molecular Functionnuclear steroid receptor activityInterproscan
GO:0004879Molecular Functionnuclear receptor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0048856Biological Processanatomical structure developmentInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08524RXRA, NR2B1; retinoid X receptor alpha-PI3K-Akt signaling pathway ko04151PMID: 28812709
Th17 cell differentiation ko04659PMID: 28812709
Adipocytokine signaling pathway ko04920PMID: 28812709
PPAR signaling pathway ko03320PMID: 28812709
Thyroid hormone signaling pathway ko04919PMID: 28812709
Bile secretion ko04976PMID: 28812709
Pathways in cancer ko05200PMID: 28812709
Transcriptional misregulation in cancers ko05202PMID: 28812709
Thyroid cancer ko05216PMID: 28812709
Small cell lung cancer ko05222PMID: 28812709
Non-small cell lung cancer ko05223PMID: 28812709
Non-alcoholic fatty liver disease (NAFLD) ko04932PMID: 28812709
Hepatitis C ko05160PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_10277-8.9 global RNA-seq network
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