Detailed information of Bpl_scaf_10153-2.20 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_10153-2.20SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7Bpl_scaf_10153176857213414+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10373EST1_DNA_bindEst1 DNA/RNA binding domainRepeatInterproscan
PF10374EST1Telomerase activating protein Est1RepeatInterproscan
PF13638PIN_4PIN domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002716DomainPIN domainInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR018834DomainDNA/RNA-binding domain, Est1-typeInterproscan
IPR019458DomainTelomerase activating protein Est1-like, N-terminalInterproscan
IPR029060Homologous_superfamilyPIN-like domain superfamilyInterproscan
IPR045153FamilyEst1/Ebs1-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR15696SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005697Cellular Componenttelomerase holoenzyme complexInterproscan
GO:0042162Molecular Functiontelomeric DNA bindingInterproscan
GO:0070034Molecular Functiontelomerase RNA bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11124SMG6, EST1A; protein SMG6EC:3.1.-.-
mRNA surveillance pathway ko03015PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_10153-2.20 global RNA-seq network
TOP