Detailed information of Bpl_scaf_10153-2.19 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_10153-2.19THO COMPLEX SUBUNIT 6 HOMOLOGBpl_scaf_10153217036237463-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR042626FamilyTHO complex subunit 6Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR44411THO COMPLEX SUBUNIT 6 HOMOLOGInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000346Cellular Componenttranscription export complexInterproscan
GO:0000347Cellular ComponentTHO complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006406Biological ProcessmRNA export from nucleusInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13175THOC6; THO complex subunit 6-RNA transport ko03013PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_10153-2.19 global RNA-seq network
TOP