Gene detail

Detailed information of Bpl_scaf_10139-3.14 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_10139-3.14	TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA	Bpl_scaf_10139	335866	356264	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_10139-3.14

CGGCAATATCGGACTTTTACCATTTTCATTTTGTCGTAAATAAGCTGATGAAAGTTGTGTTGAACAAAATGCCAGCAGGCGAATCAGATAAAATGGAAGATTTAAACGAAAGAATTGAGTCGTTTAACAGAGAACTGAAACAAGGTGGTGGCGAAGGTTCCTTTAATGTAGCTTACAAAACAGTATCATTGCTAGTTAGAGTAATATCACAGACCAAATGGACAACAGCTAAAGAGTTGTTGGACAATGTAACAAGTCATGGTAAAAGAATGATAACAGCTCAGCCATCAGAATCTGCTGTTGGTAATATGGTTAGAAGGGTCCTTAAAATCATCAGAGAAGAGTATGCCAGTGCATTAAAGGGAACTGAGGAAGGTGATCCACAAGAATCTCTACATAAATTATTGTTAGCAGAAGGACAAAAAGAAGATTATGGCCAATCAGTACCAAATCTAAAGGCAACTGTGATAGAAGCTATAAATGAAATGAAGACAGAACTAGAAAATAGTGCTGATAACATAGCAGGCCAGGCTTTAGAACACATACACTCCAATGAAGTGATATTGACAGCAGGAAAATCTAAAACTGTAGAAGCATTTCTTAAGAAAGCAGCAAAGAAAAGAAAGTTCCAAGTGATTGTTGTGGAATGTGCTCCATTTTATCATGGACAAGAATTAGCCATGAGTTTAGCAAAGCAAGGAATAGAAACCACAATGATAAATGATTCTGCTGTATTTGCCATAATGTCCAGGGTAAACAAAGTTATTATGGGAACACATACTGTCATGGCCAATGGAGGACTAAAGGCAATAAATGGAAGTCATGCTATAGCTCTTGCTGCTAAACATTATTCTGTACCTTTGATAGTATGTGCCGCTATGTTTAAGTTGTCACCACAGTTTTTATGCTCCTATGATCAGGATGCTTTCAACAAATTTGTCAGTCCACAAGATGTACTGAATTTTTCTGAAGGAGAAATTTTATCTAAAGTGCAAGTTAATAATCCAGTATTTGATTATGTACCTCCAGAACTGGTTACTCTTTATGTATCAAATATAGGAGGAAATGCCCCATCATATGTGTACAGATTGTTAAGTGAACTCTATCATCCAGATGACCATGACATTTAATAAAAAAAAAAAAACCATACAAAATGTAATGTTTTTCTTAATACATTGTACAGTGTTTAGTTGTAAATGTATTCAGGATCATTGCTGTAAACTACTGTCCATAAGCTTATTACTTTCAGTAAATGTATAAGAGGTGGTCACCAGTAACTTTACTGTCCATAATCCTATTACTGGTAGTAAACATATTATAGATAGTCACCAGAAACAGTTATCACTAGTTTTAAGTGTACATGTATGATAGATTTCGACTGCAGAGAACAAGTTTAAAGTGAGATCAGCAATAAAATTGATTTTGACCCAGTTTATGTGTTAACACAATTAGATATAGACTATTGGGCATTTTATTTTCACTTATTTCTTTTTTTTATCAAAGAGAAATGAGTACATGCTCAGGACATGGTCCTTATTATAGAAGTTGATTCTCAGAACATAGCTCTTGTTATTAATGAGTGAGTTTGTACTATCAACTGGAGTAAAGAGCCATTTCACACTGTTTTAAGGGTACGAGTTGTGCTCATTATTGTGCTTCCCTGACTTTGTGTTTAAATGTAAAGGAGGATAGTGTATCATATTCATTTACATCTGTATCCTTTCTTACTAACTAATCATTGTGTTGTTGACTATATTTTCCCAACATTCTATTATCTGGACATCATTTCATGTTGGTACTGTAATTTATACTAGCCATGTCTTTGTGTTTATATATCCCCAAAACTTGCAATCAATTTATTATGTAACATGATTTTCCCTCGTGTCATTTTCGTCTTCCACCATTTGTATGAATTTGACACAACACTGTAAAACATAGTATAAATGTTCAAAATAAGTTGTCAAAACTGTTTAATATTAAAATATTGTATGAGATTTTCAATGAAAAAAAGATATATTATTTTCATAATTTTTTATTTGCAAAATAGTCTCTGTATAAACATGTCAAAAGTATAAAGAGCATATTAATGTTAATGTTTGAACACTGCTCATTAGCACTACAGAAATGAAACACACACCATGATTGGTCAGATCAGTCACATGACTTAGTAAACACACACTATGATAGGTCAAATCTCAGGTCTTTTAACATGTGTATAAATGTTCCAGACCATACGCGTATTTGGACCGTACGCATATATTTTCAAAATACCTATACGGTCGGACCGTACACGTACGGTCTGCCTAGTTTCAAGAGATTATCGAAGCTTCAAAAATATTTTACAGATCAATGTTATTCGAATCTAAAATATATTTTAATTATCGCAATTGTACAATTTAGAAATAAGTCTAATTTAATCTATTAACAAAACAAGTGTCACTCTGGGCGTGCATGCGAAAATCAATCGTAACTACTCGGCCATTCTCGCTACCCGGCAAATAACCTCGTACGTAGATAACTCGAATAATTCAAGTCCTTTCCGTCTCCGATTCTCTCCGCTTCTAGCGACCAGCGGGAGCGTAATATAACGATTGGATTATTCGGGTTATGTACGTAGATAGTAGAAATTCTTCTTAAATTGTTTGCCGGAAGTTAAGCTGCACAAAAATATAGTCCACGAAAATCCAATATGGAAGACATACTAAGTAAAATCTAATCATGCAAAACTAATTAAAACTTTAACTTTTATCCATGAAAATAATTGAAATATAGAAAATTCTTTAAAATATAACTTTATCAAACTTTCATGTAACTGACATGTGAAAAGTAGTTCTATTTATCCGCCTACTACGTACAAGGTTATTTGCAGGGTAGCGAGAATGGCCGAGTTGTTACGATTGTGCAAAAATGTGATTCAGGTAGACAATTAAAATTATAGTTCAGAAACTGTTTACTTTTCATGAGGTGATGGTGTTTTGTTTAAAGTAATAATAATTATTATGATAAATGTAGTTTCTAAAACTCAATAAAAGTTTATGATATAATGTTTGTATTGTAAAAACCTATATGGTCTAAATACCCGTATGGTCCAGCTCGTACTAGACCATATGAGTATACTCATACGGTCCAAATACGTGTATGGTCTGGAACATAAACAACAATAATGGTTCTTCTCTTAACCAATTAATAAAAACAAACAAACAAAACTCAACTGAATTCATTTTTTTTCAATCTGAACATGTAGCATTTTTGATAACTAAAAATTGATTATTTATGAAGAAATAACAATCTTGAAT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01008	IF-2B	Initiation factor 2 subunit family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000649	Family	Initiation factor 2B-related	Interproscan
IPR037171	Homologous_superfamily	NagB/RpiA transferase-like	Interproscan
IPR042529	Homologous_superfamily	Initiation factor 2B-like, C-terminal	Interproscan
IPR051855	Family	Eukaryotic initiation factor 2B subunit beta	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45859	TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003743	Molecular Function	translation initiation factor activity	Interproscan
GO:0005085	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005851	Cellular Component	eukaryotic translation initiation factor 2B complex	Interproscan
GO:0006413	Biological Process	translational initiation	Interproscan
GO:0044237	Biological Process	obsolete cellular metabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03754	EIF2B2; translation initiation factor eIF-2B subunit beta	-	RNA transport	ko03013	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_10139-3.14 global RNA-seq network