Gene detail

Detailed information of Bpl_scaf_10095-1.7 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_10095-1.7	LD25575P	Bpl_scaf_10095	119518	134311	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_10095-1.7

ATGAAGAACAAAAATGGTGTATACAGTGCAAGTCAAGATGTTGAGGATCATTTGGCCATGGGGAAGAAACTTTTAGCTGCTGGACAGTTGGCAGAAGCTTTGTCTCATTACCATGCAGCTGTGGATGGAGATCCAAGAAACTACTTAATATATTTCAGAAGAGCAACAGTTTATTTAGCCTTAGGAAAATCTAAGTCAGCACTACCTGATCTCAATAAAGTTATTGAACTTAAACCAGATTTTACAGCAGCAAGATTACAACGAGGTAATGTTTTGTTAAAACAAGGCAGACTTCCAGAAGCCAGGGAAGATTATGAAACAGTTCTGAAAAAGGAACCTGCAAATGAAGAAGCTACTCAACAGTTACAGTTATTGGCTCCCATACACAGTGATATTTTATCAGCAAAAGATTTCCACAGAAATAAACAATTTGATGCTGCAATAGATCTCTTAGGAAGGGTTGTTGATATATGTCCATGGGATGCTGAATTAAGAGAAATAAGAGCCGACTGTTACTTAGCTATAGGGGAAAATTTTAAAGCAATTAGTGATATTCGCTCAACAACGAAACTTATAAGTGACAATACAGAAGCATATTCAAAATTAAGTCATATACATTATCAGATGGGAGATGCTGAAGATTCTTTAGTACAAATTCGTGAATGTTTAAAATTGGATCAAGAACATAAACAATGTAAAAAGCATTATACAAAAGTGAAAAAACTTGTGAAGCAACTAAATGCAGCTCAAGACTTTAAAAATAACAAACAATATCAGGAGTGTGTAGATAAAGCCAAACAAATACTAGTAACAGAACCAGCAGTAGAACAATATTTAATAAAAGCTCATTTATTTCTCTGTCATTGTAATCATAAGGTAGGACATATAAAAGAAGGATTTTCAGCATGTGATACAGTGTTAGAATATGATCCAGATAATATAGATGCTATTATAGATAAAGCAGAGACATATCTATCTAATGAAGAATATGATGAAGCAATAAGAGAATTCAGTGAAGCTCAAAATAGAGATCAAGATTCCAGGAGAATACGAGAAGGAATGAATAAAGCTCAAAAATTAAAAAAACAGTCTCAACGTAGAGATTATTATAAAATTTTAGGTGTCAAAAGAACGGCATCAAAAAAACAGATTTTAAAAGCATATAAAAAATTAGCCATGAAATGGCATCCTGATAAATATGATGGTGATGATAAAAAGACAGCAGAAAAAATGTTTATAGATATAGCTGCTGCTAAAGAAGTTTTAACAGATCCAGATAAGAGAAACAAGTTTGATAATGGAGAAGATCCTTTAGATCCAGAAAGCCAGAATGGTGGGGGAGGGTTTAATCCATTTGGTCAGGGTTTTAATCCATTTGGAGGTGGAGGCGGGGGAGGACAGGGTTTCAATTTTAAATTCCACTTTAATTGATGTCAACAGATATTTAGTTTTATACAAATATTATATTTTGCTAAAAATGCCAGGAAAATTGATATGATGAGAAAATGTGTCTGAGATTTTGCATGTGTTGTGTGTGTGTGTGTGTGTTACTATTTTGTGAATCAAAATAGCTTCTTTTTTTTTTTGAGGGACCATTTAGTGGATGTGGTTTGTAAGAAGTTATAAATATGCTGATCAAAAGGAAAAGAAAAAACTCCCAACAAATTATGCAATCTCATAATGAAGCTGCCTCGCATTGTTGTAAATTTAAATGATAAACCAACTTTACCCACTATTAAAATGTTGTGAAGTTGTAATTTACACTTTTACGAAATTTATTTTAATAACAGAGCATTAATATATGTTTGAAATGCTTACATTAGTTTTAAAAGTGCCTTTATAAGGAGTATATATGTTAATTACTGTGTAAGCATTTGAAACATTTATCTAATAGCTTGCTGTTTACACTGAACAATTTATACCACTACTTAACTGTAAAGCTTACTATTAAATTGATCATAGGGAATTTATATATATATATATTTTACAATCAAATCTACCCATTTGGTCAACTCAATTAAGCAGTCACCTGTATTAAAAGGTCACCATTTTCTTGTCTAAGAGGTTGCCACTTTTTCTTTGTCCCAAAGGTGACATTTATGTACTTGCCAGTCAGTTTCATTTCTGTCTGTTGTATTCTTGTATTTAGTTATTCATGGTCAGTTTTTATTTGGATAAGAGTACTTCTCCTATTTTGTATTTACAGGTGTTTTTGGGGTTTTTTTTCTTCACAAGTTCTTGATGTATTATCAATATTAACAACGTAAGAAGAACCACATAGGAATAAGGTTCAGTATATAAAGTGCCTTCTTGTTAAAATATCAACTGAGACATGAATTTTAGCATAGAAATAAACTACTCTTTTAAAATGAATCATTCAAAGCACATTTTTTAACTGTGATGTTACAACATTGATAGAAGTTTTTACTCACTTTCTCGAGACATTTTGGTAAAATTTCCAAGCTGGAAAAATAGACAAGTGAGAATTAAAGACAGTTTAAATCCAAGTTGACAGATCTGTCTCATTTAAATTTAAAAGTTGAATTAAGTTCACAAAGTACATGTTGCAATAGAGGTCCAGATTTTGTACATAAGAATACACAGACTTGGCTATATGTTACTGATGGGCATTGCAGCCTATAGGCTCTTGCTATTGAACCCCTTTAAGCATCAATTCAAGAAAATGTTGTAATTTTCATGTGCACATAGAACTTCTAAATAAACTAATAGCAATTACATCGCACTGGGATCATATTTGGTTAACTCACTATATAGACACATTTATTCTGTTGTATTATTTATATGTAAGAAATCCATGATGTTGTATTTGCCTACAGATTACTTTTTAAGCTGTAGATTCTAAAAAATTTTGTATTGAGAATTGTTTTACAGTAGTCAAGATCAAAATCAAAAATCATGAACATTACAATGTGTTATTAAAATGAAAGGACACATGGCTTTACTATATTTCAATTATCAATTACAATCTGTATGTTCTACTGAAACCTTCAGTTAATATTTATATAAGGTAAAAGTTCATGAGGTTTAAAAATCGGGAAAATATCAAAATAATTTGACAAATATTTCTTTCCTATTCATTTACATGCATTTCACGTTTTGTGACTTTATTATTATACTTTATTTAACTGAATATCAATAAAAATTACTATCATTACTTGTATAATATAAATTTCTTCTTCATTTCTTCCCACCTTCTATAACCTTCTGTAGAAACTGTGATATGTTATCAATCATCAATATGCTCATGAAATTGCACCCTTTTTTTAGAAATATACAAATTGTAACATGTGATTTTGAAAAGAAGAAAAAACAACAATTTCCAAAAAAATAAAATTAGAGATATAAACTACCCACCTTTTGGGGCTGAGGGCAAAAAGGTGTGTGATGTCATTATCACCTTTGCCAGAAGGGAGACAACTTACTATTGTTTTTAGACTTGTGGAAAATAAAAATGTATCTTTTTACAAGTACATCTTATGATACATAATCCTGTTTTAATTTTTGTTTTGTTTCCGAATTAAGATTTTATATGGTTAGAAAAGCCAAATATGTAATATGATTATAATCAACTCTATCTTTGTTCAAATGTCAAATCTGTCTATGTTAATTGTAATGGTGGTATCTTGGCAGGGATTGTTGTTACTGTGTATACATGTATTGATGGATGTAAAGGTTGATGTATGGTTCATATTGCTGCACAGTGTGATGGCAAGTTGTTTTTATTTATGATGAAAAATACAAAAAATTAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00226	DnaJ	DnaJ domain	Domain	Interproscan
PF09976	TPR_21	Tetratricopeptide repeat-like domain	Repeat	Interproscan
PF13181	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF14559	TPR_19	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001623	Domain	DnaJ domain	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR018704	Domain	Tetratricopeptide repeat-like domain	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR036869	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR051727	Family	DnaJ Homolog Subfamily C Member 3 Co-Chaperones	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44140	LD25575P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan
GO:0034975	Biological Process	protein folding in endoplasmic reticulum	Interproscan
GO:0051087	Molecular Function	protein-folding chaperone binding	Interproscan
GO:0051787	Molecular Function	misfolded protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09523	DNAJC3; DnaJ homolog subfamily C member 3	-	Protein processing in endoplasmic reticulum	ko04141	PMID: 28812709
K09523	DNAJC3; DnaJ homolog subfamily C member 3	-	Influenza A	ko05164	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_10095-1.7 global RNA-seq network