Detailed information of Blon|HiC_8G000162 in Branchipolynoe longqiensis Gene info
Gene IDAnnotationChromosomeStartEndStrand
Blon|HiC_8G000162DNA REPAIR PROTEIN XP-C / RAD4HiC_scaffold_81549694715517697+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03835Rad4Rad4 transglutaminase-like domainDomainInterproscan
PF10403BHD_1Rad4 beta-hairpin domain 1DomainInterproscan
PF10404BHD_2Rad4 beta-hairpin domain 2DomainInterproscan
PF10405BHD_3Rad4 beta-hairpin domain 3DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR004583FamilyDNA repair protein Rad4Interproscan
IPR018026FamilyDNA repair protein Rad4-likeInterproscan
IPR018325DomainRad4/PNGase transglutaminase-like foldInterproscan
IPR018326DomainRad4 beta-hairpin domain 1Interproscan
IPR018327DomainRad4 beta-hairpin domain 2Interproscan
IPR018328DomainRad4 beta-hairpin domain 3Interproscan
IPR036985Homologous_superfamilyTransglutaminase-like superfamilyInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR042488Homologous_superfamilyRad4, beta-hairpin domain 3 superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12135DNA REPAIR PROTEIN XP-C / RAD4Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000111Cellular Componentnucleotide-excision repair factor 2 complexInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0071942Cellular ComponentXPC complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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