Detailed information of Blon|HiC_6G000899 in Branchipolynoe longqiensis Gene info
Gene IDAnnotationChromosomeStartEndStrand
Blon|HiC_6G000899LUPUS LA PROTEIN-RELATEDHiC_scaffold_69118688791242164-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05383LaLa domainDomainInterproscan
PF21071LARP1_HEATLARP1 HEAT repeat regionRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002344FamilyLupus La proteinInterproscan
IPR006607RepeatLARP1-like, DM15 repeatInterproscan
IPR006630DomainLa-type HTH domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR045180FamilyLa domain containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22792LUPUS LA PROTEIN-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000339Molecular FunctionRNA cap bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0010494Cellular Componentcytoplasmic stress granuleInterproscan
GO:0045727Biological Processpositive regulation of translationInterproscan
GO:0048255Biological ProcessmRNA stabilizationInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP