Detailed information of Blon|HiC_5G000856 in Branchipolynoe longqiensis Gene info
Gene IDAnnotationChromosomeStartEndStrand
Blon|HiC_5G000856LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDHiC_scaffold_57727663877301578+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00431CUBCUB domainDomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000859DomainCUB domainInterproscan
IPR000998DomainMAM domainInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR050685FamilyLow-density lipoprotein receptorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24270LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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