Detailed information of Blon|HiC_1G002533 in Branchipolynoe longqiensis Gene info
Gene IDAnnotationChromosomeStartEndStrand
Blon|HiC_1G002533C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATEDHiC_scaffold_1186033389186095643-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00333Ribosomal_S5Ribosomal protein S5, N-terminal domainDomainInterproscan
PF00763THF_DHG_CYHTetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domainDomainInterproscan
PF01268FTHFSFormate--tetrahydrofolate ligaseFamilyInterproscan
PF02882THF_DHG_CYH_CTetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domainDomainInterproscan
PF03719Ribosomal_S5_CRibosomal protein S5, C-terminal domainDomainInterproscan
PF21251S5p_N40S ribosomal protein rpS2 (S5p), N-terminalDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000559FamilyFormate-tetrahydrofolate ligase, FTHFSInterproscan
IPR000672FamilyTetrahydrofolate dehydrogenase/cyclohydrolaseInterproscan
IPR005324DomainSmall ribosomal subunit protein uS5, C-terminalInterproscan
IPR013810DomainSmall ribosomal subunit protein uS5, N-terminalInterproscan
IPR014721Homologous_superfamilySmall ribosomal subunit protein uS5 domain 2-type fold, subgroupInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR020628Conserved_siteFormate-tetrahydrofolate ligase, FTHFS, conserved siteInterproscan
IPR020630DomainTetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domainInterproscan
IPR020631DomainTetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domainInterproscan
IPR020867Conserved_siteTetrahydrofolate dehydrogenase/cyclohydrolase, conserved siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR046346Homologous_superfamilyAminoacid dehydrogenase-like, N-terminal domain superfamilyInterproscan
IPR048584DomainSmall ribosomal subunit protein uS5m, N-terminal domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR48099C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004329Molecular Functionformate-tetrahydrofolate ligase activityInterproscan
GO:0004477Molecular Functionmethenyltetrahydrofolate cyclohydrolase activityInterproscan
GO:0004488Molecular Functionmethylenetetrahydrofolate dehydrogenase (NADP+) activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0035999Biological Processtetrahydrofolate interconversionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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