Gene detail

Detailed information of Blon|HiC_18G000330 in Branchipolynoe longqiensis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Blon\|HiC_18G000330	MYELIN-ASSOCIATED OLIGODENDROCYTIC BASIC PROTEIN MOBP -RELATED	HiC_scaffold_18	32240647	32315868	+

Gene Structure

More details in Jbrowse Sequence

CDS

Blon|HiC_18G000330

AAGATCGAGGAGGAGATGAAAGATGAAGATTCTAAAGTCGCGATTCTCACCAAACAGAAGAACTTTAACGACAACTGTTGCATGCGATGCTTCTCAAAGTTCTACTTCATCTTCAATCAAAAGGTTCAGTGTCTGCAGTGCCAGTACTTTGTGTGTAAAAGTTGCTCCAAGTATCTAACACAAGAAAAGGAATACATTTGCAATGTCTGCAATAAACAGAGGGAGCTGGGTGCACAGAGCTGCGACTGGTTCTATTCCAACATCCGACAGAAGTTCAAACGCTTCGGCAGCGCCAAGGTGGTGCGTTCCTTGTACAAGCGGAAGACAGACTCGGACAGCGAAAACGACAGTGGCTATGACCCATCGCAGTACAGCAATTCACTTCCAGTTGGCAAGCGTTCCAGGCGAACCATTGAGGGCTTCTTCGCTGACCTCAATAACCAGCATCCAGTGCAACAAGACGCCAGCGGTGGGCCACGTGACTCGGACGCTGAGCTGACGGCGTTTCGCACGTCATTGAACCATGTCGTAGATGACGTGCATGGAAGACTTGACAACAATGTCACCACACTGGACGTCAGCAATGAGGCATCACCTAGCCAATACGATGACCTGCTGGCAGACCAGAGACAGGCACTCTGTGTGGCGCTGTCCGAGTTGGCAGGCGGGCTGAGTCGGGCCGACAGTGAATCGACTGCGAAGACACAAGAAGAAGTTGACGAGGCTGTGCTTCAAGAAATCAGACGCTACCTTGGACATGATGTCCCCATGGGAGACGCGACAAGTCGGAAGCCAGGCACCGCTCAATGGAACCCTCTCGCTGCCACCATTATCCATAAGGTGGTGCGCGCTCGGTGGGAGGCTGACGAACAGCTCCATCGGCGGGAGGAGGCGAAGGTCCGACGGTCGCTGACGAAGCTCTCGAACCAGTGCACCATCACCCAGCTGACGGACCGCATGTCCGAGACCGAGGACACCCAGAACTCGACCTTCGCTGAAACTGACAACGAGAGCCAGTTCTCGGAGCAACCGGAAGTGGACCCGGCCTCTTCGAGCAGGCCACGCGATGACGTCACTGCTTCCGGTTATGAAGTCACAGACGAAGTCGATGGCAACATGTCCAATCTGAACGGAAGACGCGACTCGGAGCTGGACCTGGACGACCTGGTCGCCCTGAACTCCCCCGCGCTGGGCAGGCGCACCGGGCAGGCACACAAAGCGAGATCTGTCATCGGACGCATCCCGCAGCACATGCCCGTCTCCTCGGTCGAAAGTGGGGAGGTGACCATCACAGTGACGTCCCCAGAGGAGGAGGAGAGGGAGCGGAAGAGTGAAGGGGGGAAAGATGAGGCTGTGACGTCACCACCGGAAGTGAACGCAAATGAGACGCAGCTGCAGCTTGAGCTGAGGGAGCTGGCGGCGGCCATGATCTCTGGTAGGGATCAGCAGCATGCCCTGGTGTCGCTGCAGATGACCGAGGTGGTGGAGACCGGAAGTAGAAGTAGCGACGGGGAGGAGAGTGACGTCACCATCGGGGCCGACGCGGACAATGACGACCGACTGGAGCCAGTGTCGGAGCCGACGATCGAGGCAAGTAGTCGGGCAATGCTTGCGAACGCAGTCCCCGCGTTCCGCTTCGAAGATGATGACCTGGACCTGGACATGGACCCCGACGTGGACCTCGAGGCGGCATTGCGTCTGAGCACTGGCTGCGGCATTCCGCTGCCGTCGCTGGATGACGACATTGATGGGGCACTGGGACTGGACGAGGTGGACCTGGATGATCTGAGCCGACACGAAGCCGAAGACGGAGTGTTGCCAGTCGAAGCAGGCACGACACTCGAGTCTGAGATCCTCTTCGGCCCTGGTGATGGTCTCTGGGAGATTGAACAGCCGAAGCCGCTCTTCAGGACGCAGATATCAGCCTATGACAATTTCGGAGAGCGAAAAGTCGGGAAGGATGTGGACGGCCCCCTGTTGATGATGGTCCCGGGGGAGACCGTGCCCCCGACCATCGGCGAAGAGACCCTTGACAACCTGTCTGACCTTTCTGAAAACGAGGCTGGATCCCAGACGCTGTCCGACTTCCTGAGTGACTCTGAGGAGGAGGAGGAGGGTGTACCGAGGACGGCAGACTTCACCACACAGACCGATGACCTTGAGCAGCTTACCGGTGCCCAGGATTACATGGCTATCAGATCTGGAGTGGCGAATACTGGCCACCAAGACGAGGCAGCCATGAACAACTCCAGGACAACGAGAACCGCCGCCGCGTCCACGGATACAACGCAGTTAGAACTCATGAGACGGAAGAGACTCGAGGAGGCTGAGCTGGCAGCGGAGTTGGAAGCGGAGAAGGAGGAGGACCCAGAGGATGCTGATCCACGCTTTGTTGTCCGGCCGCAAACAGTGACCGTCCCACTCGGTGAACCAGCACGCATCACATGTCACGTGACCGGCACGAAGCCATTAGATGTCTTCTGGTACCGGGAGGGCGTCGAGGTGGCACAGCTCGAAGAGGACGAAGACACCGATGTCCACGTACTCGACGAACGCCACACACTCGAACTGTTCAACACAACACCGGAAACGGCCGGCCGCTACGTGTGCATCGCCATCAGTGACAAAGGTCACAGCCACAAGGCCTTCAGGGTCAAGGTCACCAAGAACACTGGCGAGCAGTCGACCCCCGAATTCCTGAAGCAGATTTCTGAGGCGGAGGTCCTAGAGGGTTCGGGCGCCAGGTTCCACTGCAAAGTGAGGGGGCGCCCACAGCCGCGAGTCACGTGGTACAAGGATGGAACGCGCCTGCGCAGCGACCACCACCACCACATCCAGAAACAAGGAAACCGCGACTACGTGCTGATCATTGATGACGTCACACTGGATGATGACGCAGAGTACCGCGTGGTGGCGCGCAACGTGGCGGGACATGCGCAGACGACCGTGCAGCTGCTGGTGGAGGCGAGGACGGACG

Transcript

Blon|HiC_18G000330

TAAGATCGAGGAGGAGATGAAAGATGAAGATTCTAAAGTCGCGATTCTCACCAAACAGAAGAACTTTAACGACAACTGTTGCATGCGATGCTTCTCAAAGTTCTACTTCATCTTCAATCAAAAGGTTCAGTGTCTGCAGTGCCAGTACTTTGTGTGTAAAAGTTGCTCCAAGTATCTAACACAAGAAAAGGAATACATTTGCAATGTCTGCAATAAACAGAGGGAGCTGGGTGCACAGAGCTGCGACTGGTTCTATTCCAACATCCGACAGAAGTTCAAACGCTTCGGCAGCGCCAAGGTGGTGCGTTCCTTGTACAAGCGGAAGACAGACTCGGACAGCGAAAACGACAGTGGCTATGACCCATCGCAGTACAGCAATTCACTTCCAGTTGGCAAGCGTTCCAGGCGAACCATTGAGGGCTTCTTCGCTGACCTCAATAACCAGCATCCAGTGCAACAAGACGCCAGCGGTGGGCCACGTGACTCGGACGCTGAGCTGACGGCGTTTCGCACGTCATTGAACCATGTCGTAGATGACGTGCATGGAAGACTTGACAACAATGTCACCACACTGGACGTCAGCAATGAGGCATCACCTAGCCAATACGATGACCTGCTGGCAGACCAGAGACAGGCACTCTGTGTGGCGCTGTCCGAGTTGGCAGGCGGGCTGAGTCGGGCCGACAGTGAATCGACTGCGAAGACACAAGAAGAAGTTGACGAGGCTGTGCTTCAAGAAATCAGACGCTACCTTGGACATGATGTCCCCATGGGAGACGCGACAAGTCGGAAGCCAGGCACCGCTCAATGGAACCCTCTCGCTGCCACCATTATCCATAAGGTGGTGCGCGCTCGGTGGGAGGCTGACGAACAGCTCCATCGGCGGGAGGAGGCGAAGGTCCGACGGTCGCTGACGAAGCTCTCGAACCAGTGCACCATCACCCAGCTGACGGACCGCATGTCCGAGACCGAGGACACCCAGAACTCGACCTTCGCTGAAACTGACAACGAGAGCCAGTTCTCGGAGCAACCGGAAGTGGACCCGGCCTCTTCGAGCAGGCCACGCGATGACGTCACTGCTTCCGGTTATGAAGTCACAGACGAAGTCGATGGCAACATGTCCAATCTGAACGGAAGACGCGACTCGGAGCTGGACCTGGACGACCTGGTCGCCCTGAACTCCCCCGCGCTGGGCAGGCGCACCGGGCAGGCACACAAAGCGAGATCTGTCATCGGACGCATCCCGCAGCACATGCCCGTCTCCTCGGTCGAAAGTGGGGAGGTGACCATCACAGTGACGTCCCCAGAGGAGGAGGAGAGGGAGCGGAAGAGTGAAGGGGGGAAAGATGAGGCTGTGACGTCACCACCGGAAGTGAACGCAAATGAGACGCAGCTGCAGCTTGAGCTGAGGGAGCTGGCGGCGGCCATGATCTCTGGTAGGGATCAGCAGCATGCCCTGGTGTCGCTGCAGATGACCGAGGTGGTGGAGACCGGAAGTAGAAGTAGCGACGGGGAGGAGAGTGACGTCACCATCGGGGCCGACGCGGACAATGACGACCGACTGGAGCCAGTGTCGGAGCCGACGATCGAGGCAAGTAGTCGGGCAATGCTTGCGAACGCAGTCCCCGCGTTCCGCTTCGAAGATGATGACCTGGACCTGGACATGGACCCCGACGTGGACCTCGAGGCGGCATTGCGTCTGAGCACTGGCTGCGGCATTCCGCTGCCGTCGCTGGATGACGACATTGATGGGGCACTGGGACTGGACGAGGTGGACCTGGATGATCTGAGCCGACACGAAGCCGAAGACGGAGTGTTGCCAGTCGAAGCAGGCACGACACTCGAGTCTGAGATCCTCTTCGGCCCTGGTGATGGTCTCTGGGAGATTGAACAGCCGAAGCCGCTCTTCAGGACGCAGATATCAGCCTATGACAATTTCGGAGAGCGAAAAGTCGGGAAGGATGTGGACGGCCCCCTGTTGATGATGGTCCCGGGGGAGACCGTGCCCCCGACCATCGGCGAAGAGACCCTTGACAACCTGTCTGACCTTTCTGAAAACGAGGCTGGATCCCAGACGCTGTCCGACTTCCTGAGTGACTCTGAGGAGGAGGAGGAGGGTGTACCGAGGACGGCAGACTTCACCACACAGACCGATGACCTTGAGCAGCTTACCGGTGCCCAGGATTACATGGCTATCAGATCTGGAGTGGCGAATACTGGCCACCAAGACGAGGCAGCCATGAACAACTCCAGGACAACGAGAACCGCCGCCGCGTCCACGGATACAACGCAGTTAGAACTCATGAGACGGAAGAGACTCGAGGAGGCTGAGCTGGCAGCGGAGTTGGAAGCGGAGAAGGAGGAGGACCCAGAGGATGCTGATCCACGCTTTGTTGTCCGGCCGCAAACAGTGACCGTCCCACTCGGTGAACCAGCACGCATCACATGTCACGTGACCGGCACGAAGCCATTAGATGTCTTCTGGTACCGGGAGGGCGTCGAGGTGGCACAGCTCGAAGAGGACGAAGACACCGATGTCCACGTACTCGACGAACGCCACACACTCGAACTGTTCAACACAACACCGGAAACGGCCGGCCGCTACGTGTGCATCGCCATCAGTGACAAAGGTCACAGCCACAAGGCCTTCAGGGTCAAGGTCACCAAGAACACTGGCGAGCAGTCGACCCCCGAATTCCTGAAGCAGATTTCTGAGGCGGAGGTCCTAGAGGGTTCGGGCGCCAGGTTCCACTGCAAAGTGAGGGGGCGCCCACAGCCGCGAGTCACGTGGTACAAGGATGGAACGCGCCTGCGCAGCGACCACCACCACCACATCCAGAAACAAGGAAACCGCGACTACGTGCTGATCATTGATGACGTCACACTGGATGATGACGCAGAGTACCGCGTGGTGGCGCGCAACGTGGCGGGACATGCGCAGACGACCGTGCAGCTGCTGGTGGAGGCGAGGACGGACG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02318	FYVE_2	FYVE-type zinc finger	Family	Interproscan
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR041282	Domain	FYVE-type zinc finger	Interproscan
IPR051745	Family	Intracellular Transport Effector	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14555	MYELIN-ASSOCIATED OLIGODENDROCYTIC BASIC PROTEIN MOBP -RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003779	Molecular Function	actin binding	Interproscan
GO:0017022	Molecular Function	myosin binding	Interproscan
GO:0030864	Cellular Component	cortical actin cytoskeleton	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-