Detailed information of Blon|HiC_15G000162 in Branchipolynoe longqiensis Gene info
Gene IDAnnotationChromosomeStartEndStrand
Blon|HiC_15G000162COLLAGEN ALPHAHiC_scaffold_151685318416926167-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF14670FXa_inhibitionCoagulation Factor Xa inhibitory siteDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR050149FamilyCollagen superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24023COLLAGEN ALPHAInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0030020Molecular Functionextracellular matrix structural constituent conferring tensile strengthInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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