Detailed information of Blon|HiC_13G000305 in Branchipolynoe longqiensis Gene info
Gene IDAnnotationChromosomeStartEndStrand
Blon|HiC_13G000305TRANSCRIPTION INITIATION FACTOR TFIIDHiC_scaffold_132410741624129361+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF04494TFIID_NTD2WD40 associated region in TFIID subunit, NTD2 domainFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR007582DomainTFIID subunit TAF5, NTD2 domainInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR037264Homologous_superfamilyTFIID subunit TAF5, NTD2 domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR19879TRANSCRIPTION INITIATION FACTOR TFIIDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005669Cellular Componenttranscription factor TFIID complexInterproscan
GO:0006367Biological Processtranscription initiation at RNA polymerase II promoterInterproscan
GO:0016251Molecular FunctionRNA polymerase II general transcription initiation factor activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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