| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| Blon|HiC_13G000298 | E3 UBIQUITIN-PROTEIN LIGASE UBR5 | HiC_scaffold_13 | 23514664 | 23583261 | + |
| CDS | |||||
| Blon|HiC_13G000298 | |||||
| Transcript |
| Blon|HiC_13G000298 |
| Protein |
| Blon|HiC_13G000298 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity|HECT |
| Ubiquitin Family | E3|E3 activity|UBR-box |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00632 | HECT | HECT-domain (ubiquitin-transferase) | Domain | Interproscan |
| PF00658 | PABP | Poly-adenylate binding protein, unique domain | Family | Interproscan |
| PF11547 | E3_UbLigase_EDD | E3 ubiquitin ligase EDD | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000569 | Domain | HECT domain | Interproscan |
| IPR002004 | Domain | Polyadenylate-binding protein/Hyperplastic disc protein | Interproscan |
| IPR003126 | Domain | Zinc finger, UBR-type | Interproscan |
| IPR009091 | Homologous_superfamily | Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | Interproscan |
| IPR024725 | Domain | E3 ubiquitin-protein ligase UBR5, ubiquitin-associated domain | Interproscan |
| IPR035983 | Homologous_superfamily | HECT, E3 ligase catalytic domain | Interproscan |
| IPR036053 | Homologous_superfamily | PABC (PABP) domain | Interproscan |
| IPR047503 | Domain | E3 ubiquitin-protein ligase UBR5, UBR-box | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46276 | E3 UBIQUITIN-PROTEIN LIGASE UBR5 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000209 | Biological Process | protein polyubiquitination | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0004842 | Molecular Function | ubiquitin-protein transferase activity | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0034450 | Molecular Function | ubiquitin-ubiquitin ligase activity | Interproscan |
| GO:0043130 | Molecular Function | ubiquitin binding | Interproscan |
| GO:0090263 | Biological Process | positive regulation of canonical Wnt signaling pathway | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |