Detailed information of Blon|HiC_12G000486 in Branchipolynoe longqiensis Gene info
Gene IDAnnotationChromosomeStartEndStrand
Blon|HiC_12G000486APRATAXIN-RELATEDHiC_scaffold_124637967846389439-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11969DcpS_CScavenger mRNA decapping enzyme C-term bindingFamilyInterproscan
PF16278zf-C2HEC2HE / C2H2 / C2HC zinc-binding fingerDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR011146DomainHIT-like domainInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR019808Conserved_siteHistidine triad, conserved siteInterproscan
IPR032566DomainAprataxin, C2HE/C2H2/C2HC zinc fingerInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR036265Homologous_superfamilyHIT-like superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12486APRATAXIN-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000012Biological Processsingle strand break repairInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0003725Molecular Functiondouble-stranded RNA bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0030983Molecular Functionmismatched DNA bindingInterproscan
GO:0033699Molecular FunctionDNA 5'-adenosine monophosphate hydrolase activityInterproscan
GO:1990165Molecular Functionsingle-strand break-containing DNA bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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