Detailed information of Blon|HiC_12G000379 in Branchipolynoe longqiensis Gene info
Gene IDAnnotationChromosomeStartEndStrand
Blon|HiC_12G000379EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATEDHiC_scaffold_123387783433898735+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Jab_MPN
Ubiquitin FamilyDUB|JAMM|JAMM

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01398JABJAB1/Mov34/MPN/PAD-1 ubiquitin proteaseFamilyInterproscan
PF18110BRCC36_CBRCC36 C-terminal helical domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000555DomainJAB1/MPN/MOV34 metalloenzyme domainInterproscan
IPR033860FamilyBrcc36 isopeptidaseInterproscan
IPR037518DomainMPN domainInterproscan
IPR040749DomainBRCC36, C-terminal helical domainInterproscan
IPR050242FamilyJAMM/MPN+ metalloenzymes, peptidase M67AInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10410EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0008233Molecular Functionpeptidase activityInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0031593Molecular Functionpolyubiquitin modification-dependent protein bindingInterproscan
GO:0070531Cellular ComponentBRCA1-A complexInterproscan
GO:0070536Biological Processprotein K63-linked deubiquitinationInterproscan
GO:0070552Cellular ComponentBRISC complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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