Gene detail

Detailed information of Blon|HiC_11G000476 in Branchipolynoe longqiensis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Blon\|HiC_11G000476	METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED	HiC_scaffold_11	47445583	47480768	+

Gene Structure

More details in Jbrowse Sequence

CDS

Blon|HiC_11G000476

ATGTTGAGGACATCATTTGTCTTGAAGAAATGCATCGCCAGAAACACACAAACGTGGTCAGTGTCTACATGTGGATCTCGGTGTATTCACCGAGAGCCGCTTGACGAGGAGTGGGCAACACTCGCCAAGAAGCAGCTGAAGGGAGCTGACCCCAAGGAGAAGCTCACATGGCACACGCCAGAGGGTATTAGCATCAAGCCGCTCTACACCAAAAAGGATGGGGACCACATCGAGGCTGAACTCCCGGGAAAGTTCCCATACACACGGGGGCCCTATCCTACCATGTACACCCAGCGGCCATGGACAATTAGGCAGTATGCTGGTTTCAGTACCGTGGAGGAGAGTAACTACTTTTACCGCCAGAACATCAAAGCCGGACAACAAGGGCTCAGTGTCGCTTTCGACCTTCCCACCCATAGAGGCTATGACTCGGATAACCCGCGAGTGCACGGTGACGTTGGCATGGCTGGAGTGGCGATTGACAGTGTTGAAGATACGAAGATTCTCTTTGATGGGATTCCACTGAACAAGATGTCGACTTCCATGACAATGAACGGAGCTGTTCTACCGGTGATGGCCATGTACATTGTAGCTGCATTGGAGCAGGGTGCGAAGCTGGATGAGCTTGCTGGTACGATCCAGAACGACATTCTGAAGGAGTTCATGGTGCGCAACACCTACATCTACCCGCCCGCCTTCTCCATGCGCATCATCGGGGACATCTTCTCATTTACATCAAGGCACATGCCCAAGTTCAACTCCATCTCCATCTCCGGGTATCATATTCAAGAGGCAGGCGCTGATGCTGTTCTCGAACTCGCCTTCACCATTGCTGACGGACTTGAGTACTGCCGCACTGGCCTACAGGCTGGGCTCGATATCGATCAGTTCGCACCACGCCTCTCATTCTTCTGGGGAATCGGCATGAACTTCTACATGGAGATCGCTAAGCTGCGAGCGGGCCGGCGGTTGTGGGCTCACCTCATGAAGAAGAACTTCAACCCAAAACAGAAGAAGTCACTGGTTCTTCGCTGTCACTGTCAGACGTCGGGGTGGTCACTGACAGAGCAGGATCCTTACAACAACATCATACGGACGACAGTCGAGGCCCTGGCAGCCGTGTTCGGGGGCACGCAGTCGCTGCACACGAATGCCTTCGACGAAGCGCTGGCACTGCCGACACGCTTCAGTGCCCGCATTGCACGAAACACACAGCTCATCCTGCAGGAGGAGGCCGGCATCCCCAAGGTAGCTGACCCGTGGGGAGGGTCATTCATGATGGAGAATCTGACCAATGACATTTATGAAGAAGCTCTCAAAGTCATCACAGAGATTGAGGAGATGGGAGGGATGGCCAAGGCGGTGGAGGCTGGGATACCCAAACTGCGTATAGAGGAGTGCGCAGCCAGGCGACAGGCACGCATCGACAACATGTCAGAGCCTATCGTTGGTGTAAACAAATACAAGTTGGCGGAGGAAGACCCCGTTGAAGTGCTGTCCATCGACAACTCACTTGTGCGGAAAAAACAATTTGCACGACTAGAGTGGGTCAAGTCGAGTCGCGACTCTGCTTTGGCGAAGGCTTCATTGGAGGCGATCACCGAATGTGCGAAGACTGGAGAGGGGAACTTACTCGAGTTGGCTATCGAGGCCACCAAAGCACGCTGCACCGTGGGAGAAATCTCAGATGCCATGGAGAAGGTAGCCGGCCGGCATGTCGCCACTGGGCGGATGGTAAGCGGGGCCTACAAGTCCGAGTATGGCAAAGATGAGGAGATTCAGCAGGTTATGGCACGCATTGAGGCGTTTTTAGCACATGAAGGTCGTCGGCCCCGAATCCTTATCGCCAAGGTCGGCCAGGACGGCCATGACCGCGGGGGCAAGGTCATCGCCACCGGCTTCGCTGACATGGGCTTCGACGTGGACGTGGGACCCCTGTTCTCAACTTCCCAGGAGGCGGCCCAGCAGGCCATAGACGCCGACGTGCACTGTCTGGGCATCAGCTCGCTGGCTGCCGGCCACAAGACGCTCGTACCGGAAGTGATCAAGGCTCTGGCCGACATGGGCAGACCGGACATCGTGGTGGTTGTCGGCGGAGTTATCCCACCCCAGGATTACGACCTCCTGAAGCAGGCAGGCGCCGCCGCCATATTTGGACCAGGCACTCGGATTCCAGATGCTGCCATCCACATCATCGACAGTATCGAAAGCGGAAACAAGAAGAAGTCAGCCAGAAGTGGCTAA

Transcript

Blon|HiC_11G000476

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01642	MM_CoA_mutase	Methylmalonyl-CoA mutase	Family	Interproscan
PF02310	B12-binding	B12 binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006098	Domain	Methylmalonyl-CoA mutase, alpha chain, catalytic	Interproscan
IPR006099	Domain	Methylmalonyl-CoA mutase, alpha/beta chain, catalytic	Interproscan
IPR006158	Domain	Cobalamin (vitamin B12)-binding domain	Interproscan
IPR006159	Domain	Methylmalonyl-CoA mutase, C-terminal	Interproscan
IPR016176	Homologous_superfamily	Cobalamin (vitamin B12)-dependent enzyme, catalytic	Interproscan
IPR036724	Homologous_superfamily	Cobalamin-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48101	METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004494	Molecular Function	methylmalonyl-CoA mutase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0016853	Molecular Function	isomerase activity	Interproscan
GO:0016866	Molecular Function	intramolecular transferase activity	Interproscan
GO:0019678	Biological Process	propionate metabolic process, methylmalonyl pathway	Interproscan
GO:0031419	Molecular Function	cobalamin binding	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-