Gene detail

Detailed information of Blon|HiC_10G000396 in Branchipolynoe longqiensis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Blon\|HiC_10G000396	DEP DOMAIN CONTAINING PROTEIN 5	HiC_scaffold_10	33662979	33729356	+

Gene Structure

More details in Jbrowse Sequence

CDS

Blon|HiC_10G000396

ACTGTGGCTCTGGATCTGGCTGAGCTTACGTATAAGGAGCAGTACTTTAGTAAGGCTGACATGTGGAGGCTCCGACAGAGTCTCGTTAATAGCTGTATATACCTCACAAAGAAAATACACTTCGCAGAGATGAGGTCGCAGGTGAACGAGCTGTGGGCGAAAGGTGAAAAGGTGACCTGTGGGGTGGTTTCAGAGGACACGCGGGTCACATTTCGCTCGTCCACGGCGCAGGTGAACATCTTCCTGCAGATGAGCTCTGAGATGTGGGAGTTCGACAACTATGGCGACTTGTACTTTGAGAAGGCCATCGGTGGATTCCTTGTGGAACTCTTCAACAAATGGAAGGACAAAAATTGCAACCACGATGTGACGATTACTCTCTTCTCCCGAACATTTTATGATGCTTCGGCAATAGAGGACTTCCCGATGCACATGAGGGAGTGCGTACAGCGGGACAACCAGGGGAGATTCTATGAAGACTTCTACCGCGTGGTGGTACAAAACGAGCGGTACGACGACTGGTCGCCGACAATCGTGCAGCTCAAGAAGCTGTTCCTAGAGTACCTGGACGGCGTGCTGCGCTACCACGAGCGGGACGGGGTCATGACGCTGCGGGCATGGAACTCCGCGTCTGCACAGGGCAACTTCCTCGAAGTCCTCAACATGGCGCTCAATGCCTTTGAGAAGCACTACCTGGACCGGTCTTTCGACCGGACTGGGAAGCTATCCATCGTCATCACACCAGGTACTGGCGTGTTCGAGGTGGACCGCGAACTCATGAACATCACCAAGCAGCGAACTATCGATTGCGGAAATGGGAGTGACCTGGTCTGCATGGGAGAGCAACCGTTACATGCTGTACCCTTATTTAAGTTCCACAGTAAGAATCCTCAGACGACCAAGTTCACCTCTGATGTAGGCGACGACTACAACATCCCACATTGGATCAACCACAGTTTTTATACGTCACACTGTCAGTCCGACTGGATTCGCACCTCCAAGTTCCTACCACGGATTAAGGTCCCCACAGAACAGGAGGACGTCTGGAAGTCGTGTAAGCGGACACCAATCAAACAACGATTATCGGACAGTCAGACAGTGATCCTCAGCTCCATTCAGGACGATATGAATCTTCCATTCGTGGACTACGACGACTACGACAGTCACGTCTTCAAGCTTCCTAACCAACGCGTCCTGAGACAGTCGATGAGTATGAGTCAGCACTCTTCGACAAGGCGGTCACGGTCCTCGAGTGGCGGTCGCTGGCCCGTGACCGCACAACGCGTGCCCCGCGTCCGCTGCAACTCAGACATCACGCGCCTGATCCCGGAGGAGAAGTCCCCCCGCCAGCCATCCAAGACCATCCTCATCCCGCAGGTGTCCAGCTCGGCCGACAGCAACAATTACATGTCCAACTCCTACGGTGGGTGTAGTGAGGCATCCACGACCACTGACGAAGACCTTTTCATCCTGCGCCCCGTGGTGGGGAGCGCTGGTTCCCCGGTCGGCCACCAGGGACCCAGCCACCCGCACTTCCGGCCCACTGCGCACAGGCGTGCACTCATCAACCCGTTTGCACCGTCACGCCTGCATTTCAAGGTCACCTCTAATCGACGACGGTGGGCGCACGCCTTCCCGACGGACCCACGTGGAGCATCCATCCAGCCCCACCACATTCTCAGCGGCAGCGGTTTGTCAGCTGACAACGTTAGTGATCTCGGTTCTTTCGCACCTTCACGAGATTCTCTCCAGACAATACGCAGTCCACGGATTCATCAGATTTCTGAGAGCAGCGATGACATAGCGATAAAGGTCCATGGGCACAGAACAAAGACCATAACCATGTCGAGTACTGAGAGCGGCAGTGAGGACTCCAGCTCGCTGAAGGAGCAGGCGGTGCTCGGGACACCGGCCCCCATCACCGGCACGAAGGGGCTCGTGCACGGGGCCAGCCCGGTCAGTCTGCCCAAGGTGGACAGCACCTCGAGCCTCTGTAGCATCTACAACATGTACGACTTGCACACAGGGTCAGCTGGCTCGGCCGGCAGGACGCGCAGCTGGACGATGGGCATCTCGGGAACGGCCGGGCGCACTTCCGCCGGATCCGGAAACGATATGCCCTACCTGTCCTCCCTGCCGCAGGGCATCGAAGAGGGCCACAACTGGCTGTGGGGCACGACTGGCGAGCAGGAATGGACCCCAGAGACAACCACTGGTATGGACTGGAAATCAATGACAATGCCGGCGTCGCTTCCGATAACGACGGATTATTTCCCTGACCGTCGCAGCCTCCAGATGGACTACCTCATGTCCGAATACGGTCTGCTGCCCGATGACGTCAACAGCGACTGGCATACGGCCTCTCGGAGTGTTCGCAAGCCACTCTCAACAGCTCAGGTTTACCGAGAGTTGGTTGCGCAGCGCCTTGCGCAAGGCTTCCAACTGGTCATTTTCCCAAAGCAACGTATTCAGCGGACTCCAGCAGACCTTGGCCAGAACACGTATCAACAACCCGGGTATCAACAACCCGGGTATCAACAACCCGGGTATCAACAACCCGGGTACCAGCAAGCTGCCTACCAGCAACCCGGGTATCAGCAACCCGGGTACCAGCAGTCGGGCCCCGTGGCTGGTGGGTTACTACGGGCTCGGTCTAGAGTGGAGACGGTGGAAGAACACATCCTCAGTATAGGACGCATCTTCCACAAGCTCTTGATGAATGGGAACACAATCAAGGTGCAGCGCTATTGGCCCAGGCACCCCTACCCACAGAAGAGCATTCACTACACGTACCGCTTCCAGGTGCCCGACTCGGGGTCCTACGATGTGTCGTGGACCAACTTCTCCTACGAGAAGCTGGAGAACTACAGCTGGAACTACGTGGACTTGTACATCCTCACTCGGGGCGCCGAGGAGGATTTCAGTCTGATGGAGTCCCTTAAATATTGGAGATCACGGTTCTGTTTGTTGCCAAGTAACAACCCGGCAACGAGAAAAATAATCGACAGCTGTACACGGTGTGACATCTATGAGGATACGCCGGTTACAGTGCAGAACTCGCTGATTGATGGATTCCTCCGCTTCATCGAGATCATGAACAAGATCAAGCGCCCTGCTCAAAGCCGCAAGCCAAAGATCTCGTTGTTGCGGTGCCACAGCGTAAACGCCGCCACCGCGTCAGACAAGGAAAAGGCAGATATTGGGATGCCGCTGATGATGTTTGCAGTGGTCAAGGGTCAGTCGCGAGTGCAGGTCACACCGCGCAAACCATGTGATCGAATCTGTCCCAAGCTTTATTCCACACTGCACGAAAAGGAAATCTTGGTGGTAACTGACCTTATGTGGTTATTGGACTACAAGCCCATATCAGACCAGGAGACCATATCAATAGGAGCAGGAGGAGTCTTCGACTAG

Transcript

Blon|HiC_10G000396

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12257	IML1	Vacuolar membrane-associated protein Iml1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027244	Family	Vacuolar membrane-associated protein Iml1	Interproscan
IPR048255	Domain	Vacuolar membrane-associated protein Iml1, N-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13179	DEP DOMAIN CONTAINING PROTEIN 5	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0005765	Cellular Component	lysosomal membrane	Interproscan
GO:0010508	Biological Process	positive regulation of autophagy	Interproscan
GO:0034198	Biological Process	cellular response to amino acid starvation	Interproscan
GO:1904262	Biological Process	negative regulation of TORC1 signaling	Interproscan
GO:1990130	Cellular Component	GATOR1 complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-