Gene detail

Detailed information of Blon|HiC_10G000279 in Branchipolynoe longqiensis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Blon\|HiC_10G000279	ELECTRON TRANSPORT OXIDOREDUCTASE	HiC_scaffold_10	23822358	23852656	-

Gene Structure

More details in Jbrowse Sequence

CDS

Blon|HiC_10G000279

ATGGCAGATTTCCTGGCTGATCTCCCGCCAGGACCTCTCGACCTCTACAGGAGCATGGCGTCATTTGATTGGAAGCAGATGAAGTGTTTCTTTGAAGGCGAGGATAATATTTTAATTGCAACAGCCTTTGTGATTGTGCAATTGCAGTTTGGAGTGTGGCAGGCACTGGAGGCTGACCCGTTGTTTGCCCGTGGCTTCGACCCCGTCTCCATAGAGGAAGCCCGAGGCAGGTGCTTCCGACAAGACCGGAGACTGTTTGAGTATGACTTCCTGCCTATTGAGGCGATTATGGAGAACCCGCTCTTGCCGAAGATACTGAATGAGGAGATCGGTAATTACGACTGGTCACTGGCCTCCAAATACGTGCTGAACACACTGATGTTCGGTCGAACTATTCTGTCAACGGGTTCAAAGAGGCATGAAGAGTTCGCTAAGAAGTGCAACAACTTCGAGATCTATGGTTGCTTCGCGCTGACTGAAATGAGTCATGGCAGCAACACGAAAGCAATGAGGACTACTGCCTCATACGACCTGAAGACACAGGAGTTTGTCATCAACACGCCGGACTTGGAGGCCACAAAGATTTGGGTGGGAAATATGGGCAAGACAGCAACACACGCGATTGTGTATGCCCAGCTGTACACGCCGGAAGGAACCTGCCGCGGTCTGCACTGCTTTGTGGTGGCCCTGCGGGACCCGCGCACACTGCGCCCCCTGCCGGGAGTGTTTGTTGGCGACATGGGAGAGAAGCTCGGTCAGAATGGGCTTGACAACGGATTTGCCGCCTTTCACAATGTCCGGATCCCGCGGGAAAATCTTCTAAATAGAACCGGTGACGTCACACCAGACGGGAAATATGTCACTCCCTTCAAGGACCCGAAGAAGCGGTTTGGTGCCTCTCTCGGAGCACTGTCTGGTGGGCGTGTTGGGATAACCGGCATCTGTGTTGCAAACTTGAAAATGGCGCTGACGATCGCAGTCCGCTACTCTGGTGCAAGACGCCAGTTCGGACCACGAGAAGGTGCTGCAGAGATCCCAGTGTTAGAGTATCAGCTTCAGCAATGGCGCCTACTTCCGTTTGTGGCTGCGAGTTATGCGCTGGACCACTTCAGTAAGACCCTTCACATGAACTACATGGAACTCCAGATGGGAATGTTAGCGGGCGACCAGTCGGAGAGACAGGCCTACTTGGGACGGGAGATCCACGCACTGTCATGCGCCAGTAAGCCGCTTTCCGGGTGGACGGCACGCAATGGCATCCAGGAGTGTCGTGAGGCCTGTGGCGGGCACGGCTACCTCAAAGTTAACCGTCTTGGTGAACTCCGTAACGACAACGACCCGAACCTGACATACGAAGGGGACAACAACGTGATTCTGCAGCAGACCGCCAACTACCTGCTGGCGCTGCTCAAGAACAAGGCTGCAGGTGGTAAGATGGCGTCTCCACTTGGCTCAGTTGACTTCCTTGATGACATGGAGGTCACCTTGAGGTCACGGTTTAACAACACCGCAAACATCGACTCCGCAGCTGCAGTCTCTGCATACCGGTGGCTGGTGAGTTACCTCCTGAAGGAAAGTGCTGACAAGTTGTCGCTGGAATTGCAAAGGGGCAGTAACAGCTTTGAGGCATTCAATGACAGCCAGGTCTACTTCTGTCACACACTCGCCATCACCTTCATTGAGCATACCGTGTTGGACCGGTTTCATCAGTATGTCATGGGGCCGGATGTACCAACAAGTCTGAGGCCGGTCCTTCAGCGACTCGCTTCACTCTATGGATTGTGGAGCCTTGACAAGCATATTGTGATACTCTACCAGGGTGGCTACATCAGTGGGCGGTCGCCGACTGATGCGATCCGATCAGCAATCGTGCGATTGTGTGCTGAGCTGAAGGATGACGCTGTTTCGCTTGTTGATGTTTACGCACTGCCGGACTTCATCCTCCATTCACCTATTGGACTTGCGGATGGACAGATCTACAAGAACCTATACGGCGCCATGCTGCAAACACCAGGAGTTCTCGAACCTCCAAACTTCCTCAGCGATTGGCTGGACAAACCCGTAATTGGTTCACGCAGACCGTCCAAGCTCTGA

Transcript

Blon|HiC_10G000279

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01756	ACOX	Acyl-CoA oxidase	Family	Interproscan
PF02770	Acyl-CoA_dh_M	Acyl-CoA dehydrogenase, middle domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002655	Domain	Acyl-CoA oxidase, C-terminal	Interproscan
IPR006091	Domain	Acyl-CoA oxidase/dehydrogenase, middle domain	Interproscan
IPR009100	Homologous_superfamily	Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily	Interproscan
IPR012258	Family	Acyl-CoA oxidase	Interproscan
IPR036250	Homologous_superfamily	Acyl-CoA dehydrogenase-like, C-terminal	Interproscan
IPR046373	Homologous_superfamily	Acyl-CoA oxidase/dehydrogenase, middle domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10909	ELECTRON TRANSPORT OXIDOREDUCTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003997	Molecular Function	acyl-CoA oxidase activity	Interproscan
GO:0005504	Molecular Function	fatty acid binding	Interproscan
GO:0005777	Cellular Component	peroxisome	Interproscan
GO:0006631	Biological Process	fatty acid metabolic process	Interproscan
GO:0006635	Biological Process	fatty acid beta-oxidation	Interproscan
GO:0016402	Molecular Function	pristanoyl-CoA oxidase activity	Interproscan
GO:0016627	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors	Interproscan
GO:0033540	Biological Process	fatty acid beta-oxidation using acyl-CoA oxidase	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0055088	Biological Process	lipid homeostasis	Interproscan
GO:0071949	Molecular Function	FAD binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-