Gene detail

Detailed information of Ama489_5db7b01a in Archivesica marissinica Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Ama489_5db7b01a	MICROTUBULE-ASSOCIATED PROTEIN	chr1	56347093	56510072	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Ama489_5db7b01a

TTTTATTATGACTGTGTAGATATTCTGACTCATTTACATGCTTCTGCGAATTGTATACAGAAGGAAAAACCATTAAATGTTAAGATTTGTCTCTGAATTTTGAAGATTGTTATCTGTACTGGTTGTGTGAGAGTCGATTCTTGGACATAACCTTAGAATGTTTGGATTTTTCCCAGGATTTTTCCCTGATGAATGATGGTAGTTTTGTGACAGTGACACAAACAAAGAATCAAGTGTGATGTTTGGGTGCGCTTGATTTAAAAGTCAGAAATCTTTGGAATAATTTGCAGAAATTTGGACCAGGAGTAACTTGTGAGATTCGTTTGGAATATAATTAGAATAGGAATTCTACGATTGGAGGATATTAATAGCTAGATCACCAGAATGGCGGGTACATCAGCGGAGAAGTTACAGAATATGAACCTCCAAGATTTTGATGGGAGTGAATTCGATCCATTTTCACCTCAAAGCAATATGACTAATATACATAATGGAGATCAGTCGGTGGATTTATTAGGAGGTTGTGGTGACAAGGGACAGTATGAGAAACGTGTGACATTTGATGAGGAAGCGGGTGTTGCACTTCCAGATCCTTCGTGTATCGTGGAAGGTCAAGGACCATTTCACGGTCAAAGTTTAATGCAAAGAAATATGAGTGAAGGGGAAATCTTAGGATATCAGAATGAATATGGTGAATCAATTATGACTCGACAGACCGAGTACACAGTGGATAGTGAAGACGAGCAAACTAATCTTATAGATATTGGTGGTCCGCACCAATCTCAAGGTCATTTATTGGGAGGTAACGCTGGCGAATATTCTATTCCAGATCCTAGTCAGAACCTGTATAATGAATATGTTGAAAATGATTTTGTGGGTGATACTGCCGGAGGTGTTCAGATTATCGAGGAACCATTTGATGGTAACTATGACAATAATGAAATTGATCCCGATTCATGGCACCCAGAAATGGATGCAGAGAGAATACGGAGGTCAAGGTCGCCAGAAAGGTCTGTTTCCCCCTATGTGAGATCAGACAGTTATGGGGATGCAGACTCTGACATGATTAGCTACCCTTCAGAAGCCGTAGGGGGCGCTAGTGATCGTGAATCAGTCATTCCAGTATCTGAGGATATCGGTACACCAGATTTCATGCCGGATTTAATATCCCAGGATTCACAGCAATTATCTTCAGAAGAAACGGAATCGTTGGATTCAAGATCGGAAACAGACACCCCCCGGCGACGGAGAATTCCAAGACCCAAAACAAAAATACCATTAGAGTTACCTCCCTGGGATGATAATGTGGTGGTTCCCAAGTTACCGAGAATGAAGCCGACGCTGATTGGTAAACAGGCAGATTTGCCGCCACCGTCACCGCCACAATCACTGCCGCGGCTACAGCGGCCCCGTACTGCACCTGCACGACACACCGTTAAAGATGCTTCGTCAGACAGTGGGGTTGAGGAAGAATCCAAGTCAATCAGACAGAGTTCAGCAGACTTGAAGAAGAGGTATGGAACAGACTCGACGAACGATCGATATAAACCAGGCGGCGGAAATGTACATGTGTTCTCACAGAAAGTCGATACAAGATCCGTCAACACCCGTACAGACACGACCAAACCCAGATCATCATTAATGAGTCCCAGAATTAGTCCATCTAAAGAATTACCAAAGGCTCCGACTCCAAATACCAAACAAGTGCAATCAAAAATAGGCTCCCTAAATAATGTGAAGCATAGTCCAGGAGGTGGCAATGTGAGAGTATTGAGTGCGAAGGTAGATTTTTCCAATGTTCACAGCAAGGTTGGTTCCAAAGACAAGATGGACCATAAACCCAAGGGAGGCGACAAGAAGATTTTGGACCAGAAAGTTGAGGTCACGGCCCATTCAAAGATTGGTTCTACAGCAAATATGAAGCACAAGCCAGGTGGTGGTGATAAAAAGATAGAAACACAAAAGGTAGAATTTAAAGATTCGGCCAGATCAAAGGTTGGATCCATGGACAAGGTTAAACACAAACCGGGAGGTGGTGATGTTAAGATCCTGGATGAGAAGGTAGATTTCACAGGAACGGCCAAGTCAAAAGTTGGGTCTATGGACAAGGTCAAACATCAACCAGGGGGCGGAGACAAAAAGATAGAAACACAGAAATTAAGCTTCAAAGAAACCGCAAAGGCACGTACGGACACTGGAGCCGGTTCTGGGGAGAAACAGAGTACATACGATGAGCCACGATCCGGGAGCATCACTTCATCGCAGGACGGCAGCGTACATGAATAAAGCATGCTTCATATATAACATGTTCTGTAGTTTGACCAGTCTCTCTTGTTGGTTACTGGTTCGAGCTTGAGATATCCGTGGGTAACGATGAAGTAACCTGTCCACCCATGCAGTCCAGTTTGGAGGTTCTGAAATGGACCGTGGATGAGTCTGTTATAGTCGACTACAGGTTCCGCCACAGGGTTCTGTTGTTAAAGATTCATTTAAGGTTCCGATGATCAAGATTAACCTGCCGAATAAATTAGACAGAATGTGCAAACAATATAGATCCAGATCAACCGCTACATACCACCGCGTTTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00418	Tubulin-binding	Tau and MAP protein, tubulin-binding repeat	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001084	Repeat	Microtubule associated protein, tubulin-binding repeat	Interproscan
IPR027324	Family	Microtubule associated protein MAP2/MAP4/Tau	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11501	MICROTUBULE-ASSOCIATED PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000226	Biological Process	microtubule cytoskeleton organization	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0015631	Molecular Function	tubulin binding	Interproscan
GO:0031175	Biological Process	neuron projection development	Interproscan
GO:0043005	Cellular Component	neuron projection	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-