Gene detail

Detailed information of Ama39032 in Archivesica marissinica Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Ama39032	GH11602P	scaf14	130604	181327	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Ama39032

AGCGGAGAAGGATAGAATGCCTGCTGAAAAGAGGACGCTGGTTTTAACTCATTTCCCGAGATTCCTCACCATGCTGGAAGAGGAAGTGTATGGTGATGTTTCTCCAATCTGGGACACAGAATTCTCTCAGGCAAATGTCAACAGTACAGGAACTAATTCTGATGCTAGTTCAGTTGCTTCCTCCGAGAAATCTGATGACAAAAATACGCCAGTAGCCCTCCGAAGGTCCTCGAGGAATGAAGCGCTTGCGGGTTTATACAGCGAAAAGAGGAAATTGGAGGAAGTAGTTGAGGTTGAGGAAGTAAAGAAACCAAAGGTTGACGGAGACGTTCCGATGGACCTGATACAGGAAATAGTTGCCACGATATCGGATCCCGAGGAAATGGTTGGACCTGAATCATCATTGTTTCCTAGTCATGCCTCAAGAGACGAGAGTGCAAGGAATGAGGAGAAGAAGGGAGTTATAGAATTTCACGTCATTGGAAACTCCCTCAGTAGAAAACCTAGTCGACAGTTGCTTATATGGCTGATTGGTATGCAAAATGTGTTCTCCCATCAACTTCCCAGAATGCCAAAGGAATATATCACAAGACTTGTGTTTGATCCGAAGCACAAGTGCCTAGCACTTGTCAAGGACAATAATGTAATAGGTGGTATATGCTTCCGAATGTTCCCGTCCCAGGGATTCACAGAGATTGTGTTCTGTGCCGTTACGTCCAATGAGCAGGTCAAGGGTTATGGCACACACTTGATGAATCATTTGAAGGATTATCACATAAAACACAACATCATACACTTCCTCACATTTGCGGACGAGTTTGCCATCGGATATTTCAAGAAGCAGGGATTTTCCAAGGACATAAAGCTGTCAAAGGCTGCGTATCTAGGATACATCAAGGACTATGAGGGAGCCACATTGATGGGCTGTGAACTCAACCCTAGGATCTGTTATACAGAGTTCTCCAAAACAATCCGCTTACAGAAAGAAATCATAAAGAAAATCATTGGAGAGAAGCAGGAGAAGTTTACGAAGGTGTATCCCGGTCTCACGTGCTTCAAAGATGGAGTACGGCAGATCCCGATAGAAAGTATACCCGGACTCCAGGACTGCGGGTGGCGACCTCCGCCTGATAAACCCAAATAGTTGGTATGCCATAAAAACCTGGATCAGCCACCTGTTGCTGTGTCTCGTTATTGCAGGAAGGAGCCAGCGATGGATTCAGATCAAGTTTACAACGTCTTCAAAACTATGTTACAGCAGTGCAAGACACATGCCAGTGCGTGGCCATTCTTGAAGCCGGTGGAGAAGACAGAGGCTCCCGACTATTACGACTATATCAAGTTTCCTATGGACCTTCGAACCATGGGCGACCGTCTAAAGAACAGATACTATGTTCACAAGAAACTGTTCGCCGCAGATATGACGAGAATCTTCACAAACTGCCGAGCCTACAACAAACCAGACACAGAATACTATAAATGTGCAAACACAATGGAGAGATTCTTTAACAACAAATTAAAAGAATTTTCACCTAAAGATGATTAATAGTTGGCAAGCTCAGTGGAATATTGATCTCAACGCAGCTCTCTACTCGGCACGCCTGTTTACATTTGGCATGGTAGTGTCAACGCAGCTCAGTAGTGTCAACTCGGCACTGTAATGTCAGCTTGGCACAGTAATGTCAGCTTGGCACGCATGTTTACACTTGACATGGTAGTGTCAATGCAGCTCAGTAGTGTCAATCGGCATGGTAATGTCAACTTGGCATGGTGGTGTCAAAGCAGCTCAGTAGTGTCAATCGGCATGGTAATGTCAACTAGGCATGGTGGTGTCAACTTGGCATGGTGGTGTCAATGCAGCTCAGTAGTGTCAACTTGGCATGCTATCTGTTTAATCTTTGCACAGAGTAGTGTCGGCTTAGCATGGTGGTGTCAGCTCAGCATGGTAATGTCAACTTGGCATGGTGGTGTCAGCTCGGCATGGTAATGTCAACTTGGCACTGTAACCGTAACTAGGATCTTGTTAAGACTTGTTAAGAATTTTATAAATTTGGCTATTCTAGGATTGAGATATTCTACGATTGAGATATTCTACGATTGAGATATTCTGGGATTGAGATATTCTATGATTGAGATATTCTACGATTGAGATATTCTATGATTGAGATATTTTACGATTGAGATATTCTATGATTGAGATATTCTGGGATTGAGATATTCTACGATTGAGATATTCTACGATTGAGATATTCTGGGATTGAGATATTCTACGATTGAAATGATTTTATGTTTGTATGCTGGGCGCATCGCGACCCCAAGAACCACACATGTTGGTATCCTAGGCTCATCGCGACCCCAAGAACTACACATGTTGGTATCCTAGGCTCATCGCGACCCTAACAACTACACATGTT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00583	Acetyltransf_1	Acetyltransferase (GNAT) family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000182	Domain	GNAT domain	Interproscan
IPR016181	Homologous_superfamily	Acyl-CoA N-acyltransferase	Interproscan
IPR037800	Family	Histone acetyltransferase GCN5	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45750	GH11602P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000123	Cellular Component	histone acetyltransferase complex	Interproscan
GO:0004402	Molecular Function	histone acetyltransferase activity	Interproscan
GO:0006338	Biological Process	chromatin remodeling	Interproscan
GO:0010484	Molecular Function	histone H3 acetyltransferase activity	Interproscan
GO:0016747	Molecular Function	acyltransferase activity, transferring groups other than amino-acyl groups	Interproscan
GO:0043966	Biological Process	obsolete histone H3 acetylation	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0140672	Cellular Component	ATAC complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-