Gene detail

Detailed information of Ama36161 in Archivesica marissinica Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Ama36161	EF-HAND DOMAIN C-TERMINAL CONTAINING PROTEIN	chr11	12171030	12203899	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Ama36161

ATGAAACCCAATGCGGGTATCGGCGGAGAGCCTATCATTCATAACCAGCTTTCGGAACAAGAGCTCAATGAACTAGCCAACTTCAACCCTACACTTACTTATGGACAGGCCAAGGAGGCTCCACCGGAGGACTTTTTGCCCAGTCATGTTGCGTTTGATAAAAAGGTGCTGAAATTCAATGCGTATTTCAAGCAGACAGTTCACGAGTCGAAAGACGAGTATTTCAGAGTTCGTCCCGTCAACATTTTCTATTATCTTGAAGACGACAGCATTGCAGTCATTGAACCCCATGTAGAAAACAGCGGAATACCGCAAGGGAAACTAATTAAACGGCAGAGACTGCCAAAGAATGATCAGGGCGATCACTGGCACTGGAAGGACTTGAACAATGGTGTCAATGTTACATTTTACGGCAAGGTTTTCCACATCTTAAAAATGGACCAGTTCACAAGTAATTTCCTGGACAGCGAGGGTATACTTATAAATGAGAGCGGTGAACTGCCAACAGATCCGTACATAGAGCGACGTACAAGTGCGGCTGCATTGAGAACGTTCACCACACCTTCGTCCTTCGACAAACAGAAACAGTTCCTGGAGCTCGATAGAAAGGTTCTACGTTTCTTCTGCGTGTGGGATGATAGGGACAATATGTTCGGTGAAATGAGGCCATTTGTTATACACTATTTCATGGTAGACGACACGTTAGAGGTTCGTGAAGTGCACACTGCCAATGATGGTCGGGACCCATTCCCGGTTCTCATTGGCAGACACAAAGTGCCAAAGAACAGGTACAACGTCGACTCGGCCTTCCCGGCTGTTGTCCTGGAGCTTTCGCCACACGAGATTACGCAGTATTTTACACCAAAAGATTTCACGATCGGTGAGACAGTGATTCTTTACGGAAGACGTTTCTTGATTTACGACTGCGATAATTTCACCAAGAGCTTCTACTATCACACGTTTGGTGTTACTGAGTTTGCAACTGTAGATGTTAAACAGAAATCGAAAGACCTGGCCAAAATGGAAATTCCGCCTTTCAATAGCTTTGGATCGATGGAAGATTCCCTCCAGTCGTGTCTGTCACTGATTCCTCAGCCACCAAAGAAAGATTTCATAAAAATGTTGGAAAATGATCACAAAGTATTACGATTTGAGGCAGTCATGCAGTTTTCATTTCAGGACTCTGTAAGACAAGAGGACAAGGGACGCAGGTTTATTATCTCTTACCGCCTCGCGGACGACATGATCGTCATCTATGAGCCACCAGTGCGCAATTCAGGCATCATTGGTGGGAAATTCCTGGAACGCACTCGAGTGGCTAAGCCAAACTGCCCGCCAGAGCAGCCTGTTTTCTACGGTCCACAAGATTTCCACATTGGAGCGGTGATTGAGGTGTTTAGGCACAGATTTATAATCATAAACGCCGATGAATATGTCCTCAACTTTATGGAAAACCACAGTAGCCAATTTCAAGATAGTACAATCCAGTCACTGAGGCAAAAGTTAGGGGAGGGGTCGATGATGAGAGAGACTATCAAAGGGGCTCCAATGAAAGTACAGAGAACGGCTGGAGATTTGAGCACATTAGTGGCGCAGGTCCGAGCTCAGTTGAAGAAGATTGCAATCACGGACAAGAGTCGAGTGGATGAGATGTTCTTACGTTACGATACTGATAGAACCGGAGCCATTGATGCCCTCAATATGAGAAACCTGTGTCGTAGATTGCAACTGCCTATTGATGATGATGTTATCAATGCTCTTGTGGGACAATGTACGAATGATCCAGATGGAAATATTTCTCTGGAAGACTTCAGAAGATTTGTGGAGAGTTCATGAGTTCTCTCCCTTTATAGACTAAAACAATTCCTGTGATTGAGTTACCTCCATTGAGAATAAATAATTGGATAAAAAAAAATGAAACTTGTAAAATGATAAAGTTCTAAGAGGTTTCAGGAACTAATCACCACATTTATGCTCTTTATGACTAATTAAATTCAGTAATTTTATAAACGGTTTACCTTAGAATAAAATGTTCACCATTTCGAATAGAAAAGACATGGAAATGGATGAATCATTGTACGAGTCATGATATAGGAAAGTCAACACAATTCACATGAGAAGCAGAACAAGTGAACTGGTAATCATAGAACCTCGTAATTCAAGTGTATGTTGTGGGATATTCAAAAGTAGCTAAAACCTTTCCACACTACAGACATCTAAATAGGTTAGCAAAAAGTGTAGATCCAGCCGGCTCATCAGAATTTGCACTTTTTGCTAGTGCTTTTAGTATATTTAGTAAAAGTTACCCAGTTTGATATAAATGAACTAGCCCACATGTAACTTTCTGATCAATTTATTGGTCTAAAAATATCCTGGACCGGTCCATGTCAGTTACTTGGTGTTGAATGGGTTAATAAGCATAAATTGTACTTTAGTTGGAAAATTATAATTGATATGCAAATATATGCAGTGTTAACTTTAGTAAACCACCATTTATAAAGTTATTGGTGATTTTATTAAGCGATTTCCATAAAGGG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06565	DM10_dom	DM10 domain	Domain	Interproscan
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048	Domain	EF-hand domain	Interproscan
IPR006602	Domain	DM10 domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR040193	Family	EF-hand domain-containing protein EFHC1/EFHC2/EFHB	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12086	EF-HAND DOMAIN C-TERMINAL CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000281	Biological Process	mitotic cytokinesis	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005930	Cellular Component	axoneme	Interproscan
GO:0007052	Biological Process	mitotic spindle organization	Interproscan
GO:0043014	Molecular Function	alpha-tubulin binding	Interproscan
GO:0060285	Biological Process	cilium-dependent cell motility	Interproscan
GO:0072686	Cellular Component	mitotic spindle	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-