Detailed information of Ama21375 in Archivesica marissinica Gene info
Gene IDAnnotationChromosomeStartEndStrand
Ama21375TALINchr183909330939210776-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01608I_LWEQI/LWEQ domainFamilyInterproscan
PF08913VBSVinculin Binding SiteDomainInterproscan
PF09141Talin_middleTalin, middle domainDomainInterproscan
PF21692Talin_R4Talin, R4 domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002558DomainI/LWEQ domainInterproscan
IPR015009DomainVinculin-binding site-containing domainInterproscan
IPR015224DomainTalin, centralInterproscan
IPR035964Homologous_superfamilyI/LWEQ domain superfamilyInterproscan
IPR036476Homologous_superfamilyTalin, central domain superfamilyInterproscan
IPR036723Homologous_superfamilyAlpha-catenin/vinculin-like superfamilyInterproscan
IPR037438DomainTalin-1/2, rod-segmentInterproscan
IPR049108DomainTalin, R4 domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR19981TALINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0001726Cellular ComponentruffleInterproscan
GO:0003779Molecular Functionactin bindingInterproscan
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0005200Molecular Functionstructural constituent of cytoskeletonInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005925Cellular Componentfocal adhesionInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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