Gene detail

Detailed information of Ama12182 in Archivesica marissinica Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Ama12182	REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN	chr12	40183340	40226831	-

Gene Structure

More details in Jbrowse Sequence

CDS

Ama12182

ATGACTTTAGTGTGGTATAGGTATGACTTTAGAGTCGTATCGGTATTACGCAGTTCTGGCAAGAAAAAAAAGAATCACGTGCCCGATAGAGGTGTTCGGGTGTCCGCTCCACAGGACCCACCGTCTCCAGACTTTAAGGGACTGAAACCTGATGAAATTGCCATCCTTAAAGGTGTCCTTAAGCGACAAGAAGAGTTCGAGTCAGAGGAGGCCGGAAGACAACGAAAACTTCATGAGACATTGCTGACGTATGAGGACGAGGTTAAGAAACATGCCAGTCAGAAAAGTAGACTGAAGAACGTAGACCTTCGATTATGCCGACTATGTTATAAGACCAAGTTCGCAGATGGAATTGGAAAGGCATGTTATGATTGCCATAAACGCGTGTGTAACAAATGCGGCGCCTTCTCCCACTCAACTACGAATACTAAGAAAAACAAGATTGTCAAGGGAAAATGGCGCTGCAACATGTGTCACATGAAGCGTGATGTTGTTGCTAAGACGGGTATTTGGTACCATGGTAACGCTGTGCCGGCGGGAACTTCCGGAAAGTTCAAGACGAAGTTGAGCGCCTCAGAAATCGATTCAGAAGATGATACGCACCTTCAAACGACAGACCCAACTGCAGACGACAGCATAGATAAACCGGAACCGGACGTCTCATCTGATGAAAATCACGCCTCTTCTAGCATCAAAATTGGAAGAAGATCGACAAAATTATGCACACAGCGTCGTACATCTCAATCTGAGGTGGAAGAAGTTGAAGACGAAATGGACACAGAACAATTCCAAAAGGAACGTCAAATGTGTCGTATACAGAGACAAAGCAAACGATCTAGAAGAAGGAACACCGACAAGAACAGAGCCAGCAATAAGCACATTTCCAGCAAGAAGCACATTGCCAGCAAGAAGCACATTGCCAGCAAGCACATTGCAAGCAAGAAGCACATTGCCAGCAAGAAGCACATTGTCAATAAGCACATTGCCAGCAAGAAGCACATTGCCAGCAAGAAGCACATTGCCAACAAGCACATTGTCAACAAGCACATTGCCAGCAAGCACATTCACATTTCCAGCAAGAAGCACATTGCCAGCAAGAAGCACATTGCCAGCAAGCACATTGCAAGCAAGAAGCACATTGCCAGCAAGAAGTACATTGCCAGCCAGAAGCACATTGCCAGCAAGAAGTACATTGCCAGCAAGCACATTGCCAACAAACACATTGCCAACAAGAAGCACATTGCCAGCAAGCACATTGCCAACAAGCACATTTCCAGCAAGAAGCACCTTGCCAGCAAGCACATTGCAAGCAAGAGGCACATTACCAACAAGCACATTGTCAACAAGCACATTGCCAGCAAGCACATTGTCAACAAGCACATTGCCAGCAAGCACATTGCCAGCAAGGACATTGCCAGCCAGCACAATGCCAGCAAGCACATTGCCAGCAAGAAGCACATTGCCAGCAAGCACATTGCCAGCAAGAAGCACATTGCCAGCAAGCACATTGCCAACAAGAACATTGCCAGCAAGCACATTGCCAACAATAATCACATTTCCAGCAAGAAGCACAGTGTCAGCAATAAGCATATTTCCAGCAAGAAGCACATTGCCAGCAAGAAGCACATTGCAAGCAAGAAGCACATTGCAAGCAAGAAGCACATTGCCAGCAAGAAGTACATTGCCAGCAAGAAGCACATTGCCAGCAAGAAGCACATTGCAAGCAAGCACATTGCAAGCAAGAAGCACATTGCCAGCAAGAAGCACATTGCCAGCAAGCACATTGCCAACAAGCACATTGCCAACAAGAAGCACATTGCCAGCAAGCACATTGCCAACAAGCACATTTCCAGCAAGAAGCACATTGCCAGCAAGCACATTGTAAGCAAGAAGCACATTGCCAGCAAGAAGCACATTGCCAGCAAGAAGCACATTGCCAGCAAGAAGCACATTGCAAGCAAGAAGCACATTGCCAGCAAGAAGCACATTGCCAGCAAGAAGCACATTAAGCACATTGCCAGCAAGCATGTTGTCAGCAGGAGGCACATTGCCAGCAAGCATATTGTCAGCAGGAGGCACATTGCCAGCAAGAAGCACATTGCCAGCAAACACATTGCCAAGAAGCACATTGCCTGCAAGAAGCACATTGCCAGCAAGAAGCACATTGCCAGCAAGAAGCACATCGCCAGCGAGCACATTGCCAGCAAGAAGCACATTGCCAACAAGCTCATTGCCAGCAAGCACATTGCCAGCAAGAAGCACATTGGATTAGGACTGCGTACTGTTGGAGGCAGACGAGGTTCAGATGGTGTTCTGGGTGCATACGTTACCAACGTTACAAAAGGGGGTCCAGCCGAGAGACAGGGTATTTCGGAAGGCGATCAAGTCATGGAATGGAATGGTCGGTCCCTGGTGGACGTCACGTTTGAAGAGGCGCAGGAAATAGTCAACGTGCCGGGAACCATTGTTCAATTGTCCATCATACATGGTGCTATTAAGTAA

Transcript

Ama12182

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00595	PDZ	PDZ domain	Domain	Interproscan
PF02318	FYVE_2	FYVE-type zinc finger	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001478	Domain	PDZ domain	Interproscan
IPR010911	Domain	Rab-binding domain	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR036034	Homologous_superfamily	PDZ superfamily	Interproscan
IPR039032	Family	Rim-like	Interproscan
IPR041282	Domain	FYVE-type zinc finger	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12157	REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006886	Biological Process	intracellular protein transport	Interproscan
GO:0006887	Biological Process	exocytosis	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0031267	Molecular Function	small GTPase binding	Interproscan
GO:0042391	Biological Process	regulation of membrane potential	Interproscan
GO:0044325	Molecular Function	transmembrane transporter binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-