Detailed information of Ama08544 in Archivesica marissinica Gene info
Gene IDAnnotationChromosomeStartEndStrand
Ama08544TRANSCRIPTION TERMINATION FACTOR 2-RELATEDchr1911888831207695-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000330DomainSNF2, N-terminalInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR050628FamilySNF2/RAD54 Helicase and Transcription FactorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45626TRANSCRIPTION TERMINATION FACTOR 2-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0008094Molecular FunctionATP-dependent activity, acting on DNAInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP