Detailed information of Ama01135 in Archivesica marissinica Gene info
Gene IDAnnotationChromosomeStartEndStrand
Ama01135CCR4 NOT-RELATEDchr54213327542187355-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04065Not3Not1 N-terminal domain, CCR4-Not complex component FamilyInterproscan
PF04153NOT2_3_5_CNOT2/NOT3/NOT5 C-terminalDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR007207DomainCCR4-Not complex component, Not N-terminal domainInterproscan
IPR007282DomainNOT2/NOT3/NOT5, C-terminalInterproscan
IPR012270FamilyCCR4-NOT complex, subunit 3/ 5Interproscan
IPR038635Homologous_superfamilyCCR4-NOT complex subunit 2/3/5, C-terminal domain superfamilyInterproscan
IPR040168FamilyNot2/Not3/Not5Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR23326CCR4 NOT-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000289Biological Processnuclear-transcribed mRNA poly(A) tail shorteningInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0030015Cellular ComponentCCR4-NOT core complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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