| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| Ama01102 | SEC24-RELATED PROTEIN | chr5 | 40593780 | 40647508 | + |
| CDS | |||||
| Ama01102 | |||||
| Transcript |
| Ama01102 |
| Protein |
| Ama01102 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00626 | Gelsolin | Gelsolin repeat | Domain | Interproscan |
| PF04810 | zf-Sec23_Sec24 | Sec23/Sec24 zinc finger | Domain | Interproscan |
| PF04811 | Sec23_trunk | Sec23/Sec24 trunk domain | Domain | Interproscan |
| PF04815 | Sec23_helical | Sec23/Sec24 helical domain | Domain | Interproscan |
| PF08033 | Sec23_BS | Sec23/Sec24 beta-sandwich domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006895 | Domain | Zinc finger, Sec23/Sec24-type | Interproscan |
| IPR006896 | Domain | Sec23/Sec24, trunk domain | Interproscan |
| IPR006900 | Domain | Sec23/Sec24, helical domain | Interproscan |
| IPR007123 | Domain | Gelsolin-like domain | Interproscan |
| IPR012990 | Domain | Sec23/Sec24 beta-sandwich | Interproscan |
| IPR029006 | Homologous_superfamily | ADF-H/Gelsolin-like domain superfamily | Interproscan |
| IPR036174 | Homologous_superfamily | Zinc finger, Sec23/Sec24-type superfamily | Interproscan |
| IPR036175 | Homologous_superfamily | Sec23/Sec24 helical domain superfamily | Interproscan |
| IPR036180 | Homologous_superfamily | Gelsolin-like domain superfamily | Interproscan |
| IPR036465 | Homologous_superfamily | von Willebrand factor A-like domain superfamily | Interproscan |
| IPR041742 | Domain | Sec24-like, trunk domain | Interproscan |
| IPR050550 | Family | SEC23/SEC24 family, SEC24 subfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13803 | SEC24-RELATED PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000149 | Molecular Function | SNARE binding | Interproscan |
| GO:0006886 | Biological Process | intracellular protein transport | Interproscan |
| GO:0006888 | Biological Process | endoplasmic reticulum to Golgi vesicle-mediated transport | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0030127 | Cellular Component | COPII vesicle coat | Interproscan |
| GO:0070971 | Cellular Component | endoplasmic reticulum exit site | Interproscan |
| GO:0090110 | Biological Process | COPII-coated vesicle cargo loading | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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