| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| Ama01087 | RNA-DEPENDENT RNA POLYMERASE | chr5 | 39937907 | 39951080 | - |
| CDS | |||||
| Ama01087 | |||||
| Transcript |
| Ama01087 |
| Protein |
| Ama01087 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05183 | RdRP | RNA dependent RNA polymerase | Family | Interproscan |
| PF13086 | AAA_11 | AAA domain | Domain | Interproscan |
| PF13087 | AAA_12 | AAA domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007855 | Family | RNA-dependent RNA polymerase, eukaryotic-type | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR041677 | Domain | DNA2/NAM7 helicase, helicase domain | Interproscan |
| IPR041679 | Domain | DNA2/NAM7 helicase-like, C-terminal | Interproscan |
| IPR047187 | Domain | Upf1-like, C-terminal helicase domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23079 | RNA-DEPENDENT RNA POLYMERASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003968 | Molecular Function | RNA-dependent RNA polymerase activity | Interproscan |
| GO:0004386 | Molecular Function | helicase activity | Interproscan |
| GO:0030422 | Biological Process | siRNA processing | Interproscan |
| GO:0031380 | Cellular Component | nuclear RNA-directed RNA polymerase complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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