Detailed information of Actinostola_20265 in Actinostola sp. Cb2023 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Actinostola_20265SMALL NUCLEAR RIBONUCLEOPROTEINscaffold906_size1894659489196095-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01423LSMLSM domain DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001163DomainSm domain, eukaryotic/archaea-typeInterproscan
IPR010920Homologous_superfamilyLSM domain superfamilyInterproscan
IPR017132FamilySm-like protein Lsm7Interproscan
IPR044641FamilySm-like protein Lsm7/SmGInterproscan
IPR047575DomainSm domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10553SMALL NUCLEAR RIBONUCLEOPROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0000956Biological Processnuclear-transcribed mRNA catabolic processInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005688Cellular ComponentU6 snRNPInterproscan
GO:0005689Cellular ComponentU12-type spliceosomal complexInterproscan
GO:0071004Cellular ComponentU2-type prespliceosomeInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan
GO:0097526Cellular Componentspliceosomal tri-snRNP complexInterproscan
GO:1990726Cellular ComponentLsm1-7-Pat1 complexInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP