Detailed information of Actinostola_19900 in Actinostola sp. Cb2023 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Actinostola_19900NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAININGscaffold857_size1994927271482715-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01189Methyltr_RsmB-F16S rRNA methyltransferase RsmB/FFamilyInterproscan
PF21148NSUN5_fdxn-likeNOL1/NOP2/Sun domain family member 5, ferredoxin-like domainDomainInterproscan
PF21153NSUN5_NNOL1/NOP2/Sun domain family member 5, N-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001678DomainSAM-dependent methyltransferase RsmB-F/NOP2-type domainInterproscan
IPR023267FamilyRNA (C5-cytosine) methyltransferaseInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR048889DomainNSUN5/RCM1, N-terminal domainInterproscan
IPR049560DomainSAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic coreInterproscan
IPR049561DomainNOL1/NOP2/NSUN 5/7, ferredoxin-like domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22807NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAININGInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0001510Biological ProcessRNA methylationInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0008173Molecular FunctionRNA methyltransferase activityInterproscan
GO:0070475Biological ProcessrRNA base methylationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP