Gene detail

Detailed information of Actinostola_19774 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_19774	STAR-RELATED LIPID TRANSFER PROTEIN 9	scaffold83_size682433	340181	360110	+

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_19774

GACAATACTTTTTACCTTAACGTTGTGTACAATAAACGAGAAAAAGCGCGAAATGCTACTCTCATCGTTGAAATGCATGGTGCAACAACAAAAATCATCGACCCCGAGGCACCAGACGACGAGCCCAAGAGTTTTACCTTTGATTACAGCTACTGGTCGCATGATAGTTTTGAAGAGGATGACACTGGGTATTTGTGTGGTACACAAGCTAATTATGCTGATCAGAGAAAAGTATATAACGATGTTGGACGGACAGTGCTGAAGAATGCCTGGGACGGCTACAACAGCACTCTATTTGCCTATGGACAGACAGGCTCTGGGAAGTCGTGGTCCATCGTGGGATATGGAATCAATAAAGGTTGTGATATTAACCGAGTCCGTGTAAGGGAAATTATGGACCGCAAAGTGACCAATCACAATGCACCAAGTTCCTTCGCCATATGTCATAAATTCATCTTTATAATTGTCTTTGTAGGAATTGTTCCTATATTTTGTGAAGAGTTGTTCATTGGTATTCAAAAGAAGAAAGATGAAAGTGACACTGGACAGTACGAGTCGCGTCACACTATCGTTGGAGTGACGTTCGTACAGAAGAGCAGTGAACTATCCCAAAACAGCCGTCAGTTTTCCTCCGCACGTCATTTCAATTTAGTTGTCGTGCTTTCAGACGTCTCTTATAGCGAGCGCGCTGATTCGACTGGAGCTACAGGTGACCGCCTGAAAGAAGGAGCTGCTATCAACCAGTCCCTCTCGGCTCTTGGCAACGTTATCTCAGCTCTTGTCGACAAATCCAATGGAAAGCAAGTACGAGTTCCCTACAGAGACTCAGCTTTGACGAGGCTACTGAAGAATGCATTGTCAGGAAACAGTAAGACAGCTATGATTGCAGCCATCAGTCCAGCTGATATCAACTATGACGAAACCCTCTCTACTCTGAGATACGATTATGATGATGGTGGTACTGGTGATGATGATGGTGATGATGATGATGGTGGTGGTACTGGTGATGATGATGATGATGGTGCCGATCGCGCCAAACAAATCAAAACCACAGCTACAGTTAACGAAGACCCGACAGAGAAGATGATCCGTGAGCTACAGGAACAGAACGCTAAGCTTCTAGAGAAGCTGAAAGCTGCTGAGTCTGGTCAGAAGATCCGTATCGATGATGATGATGATGATGATGATGATGATGATAAATTGTCAGATGAAGAAATGTCTGCACTCAGGAAACAAATTGAAGAAGACATCAGAGCCTCGGACAAAGACGCGCAAAAGAAAGAACGAATGGCGACTCCACATTTATGGAATTTAAATCCAGATTGTCAGTTAACTGGGATGATAGTGCACTTGCTGAAGAAAGATAAAGTGAAGATCGGCAACAAAAAGGCTGATCCGCCAGCAGACATTCAGCTTGCTGGACTAAACATCCAAAAGCAACACTGTGAGGTGAACATTAAAGGTGATCGAATTACAATCACTCCAGCTGGTGACGCTAAGGTCTTGATCAACGGTGAACCAATCACTGAAGAGGAAGAACTGGAACATCACGACAGGGTGATGATTGGTACAACTCATTTGTACGTGTTTCATCATCCAAAACAAGCAGACAAGTCCACCATTAAAGCTGATTCCATTACCTACGAGATGGCACAGGAAGAGATTACACAGAATTCTGGATTTGGGCTGGAAGAGAATAACTCCAGAGATGGCTTGTTGCTTCAAGAAGATTTGGTAGATTTGGTACCCATGGTAGAAGAAGCTAACGCCATAAGTATGGAACTCGATAGAAAGGTGTCGTTTGAAGTCGTTGTCATGTCAGCTAAAGCACGTGGTCTTAACGAAGGCAGGGCAGAGCCGTACGTATTAATGCAGAACCTTTATACCGGTCTTGAATGGCTTTGGCCCAAAAACAAGTTTATAAACCGGAAATACCTGATGCAGGAAATGTACAGTAACTTCGAGGACGGTGAGGACTGGGCGCTACCGGACGAACGAGACCCTTTCACAGAATCCCCGGATATTGATTTCATGGTCGGCTGTGTGGAGATTTCTATGGAGAGTCTTGGATATGTGCTGGATATGAGAGAACAGCTCAACATTACAGATTTCAGAGGACGAGAAGTTGGCTTTTTAAATGTCGAGGTTGTTCCTCTGGACAGCAAAGGAAACGAGATTACCGAGGAGACAGACTTGTTTATTGACAACCCACGTGACCTGGTCGGACAAAAGTTAGAATTTGTTGTTCGTATCACGAGTGCCAGAGGTCTCCCCAAGAAATACACGGATGTCTACTGTAGCTACAGGTTGTATCTAGACGAAGACCCAAAAACAGAAAAAGTATCAGGAACAACGAACCCAGACTTCAACTACGAAAGGAAATTCAACTTTGATCCCGTCAAACAACAGTTTGTTGATTATTTGATGAAGAAATCCGTGGTGATTCAAGTTTGGGGCAAACAAGTCCCCGACAAGAAGCCATTAAACAAGGCTGCTAAAGAAGGCAAGGACACCAAGGCCATCATGAAGGCAGAGAACATGAAAAAGGGAATGGCTAAAGGTTCAAAGAATGTGCCAGCTTTGGTCAACCTATCAGATCACGTGGCAATAAAAAAACGCAAAGAAAGATTGGATCTTAAAATGAATCAGCTTCGTAAGCTTTGTGATAAGCGCGAACAGGATGGACACGTTGCTGTAGCGGTTAGTATCTCTTAA

Transcript

Actinostola_19774

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00168	C2	C2 domain	Domain	Interproscan
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan
PF12423	KIF1B	Kinesin protein 1B	Family	Interproscan
PF16697	Yop-YscD_cpl	Inner membrane component of T3SS, cytoplasmic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000008	Domain	C2 domain	Interproscan
IPR000253	Domain	Forkhead-associated (FHA) domain	Interproscan
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR008984	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR022140	Domain	Kinesin-like KIF1-type	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR032030	Domain	YscD, cytoplasmic domain	Interproscan
IPR035892	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47117	STAR-RELATED LIPID TRANSFER PROTEIN 9	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-