Gene detail

Detailed information of Actinostola_18965 in Actinostola sp. Cb2023 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Actinostola_18965	ALANINE--GLYOXYLATE AMINOTRANSFERASE 2, MITOCHONDRIAL	scaffold73_size748127	373896	388303	-

Gene Structure

More details in Jbrowse Sequence

CDS

Actinostola_18965

ATGGACAACGTTTTTGAAAACAGGTCTTCAGTTTTACAGCAAAAGAATGCTCCACTTCCAGCGATTGAATTGCCATCCTGTGACTTTGAACCTGAACCTTATAAGGGAATGCCATTTGATGAAGCTAAAGATGTCAGAAAGTCTAAGCTGGGGCCTAGTCTGATGGTGTACTATAAAAACCCTGTGTATATATGGAAGGGCCATATGCAATGGCTATGGGATACCAGCAATAAAAGATACCTAGATTTCTTTGCAGGAATAGTGACTGTTGGAGCTGGTCATTGTCATCCTCACATCATAGAAGCAGCAACAACTCAGTTGAACAAGTTATGGCACACGACAAACATCTACTACAACCCAACTATTCATGAATATGCACAAGCATTAGCAGAAAAAATGCCTGGGAATCTAAAGGTGTGTCACTTTGTAAATAGTGGATCAGAAGCCAATGACATGGCATTATTAATGGCCAGAGCGCACACTGGTAATTTTGATATTGTTAGTCTAAGGAATTCCTACCATGGTACAAGCCCAGGAACACTAGGAATTCTAAACCAGTCGCCATGGAAGTTAAACATTCCTATTAGCTTTGGCTGTTTTGCGACTATGAATGCTGATGTGTACCGCGGGCCATGGGGTGGTGGAAATTGTAGAGACTCTGTAGCCCAGACAACAAGGTCATGCAACTGTGCTCCAGGTGTGTGCGAAGCATCTGATAATTATGTTGATCAGTTGGAGGACATGTTGATACACTGTACAGGAAAACGGGTGGCAGGTTTTATTGCTGAAACTATTCAGGGAGTTGGAGGATCAGTTCACCTCCCAAAAGGATTTTTAAAGAAAGCATACAAGCTAATCAGAGATAGAGGTGGTGTCTGTATTTCTGATGAGGTTCAGTGTGGGTTTGGACGTCTTGGTAGCCATTACTGGGGATTTGAAACACAAGATGTTATACCTGATATTGTAACTATAGCCAAAGGAATGGGCAATGGATTCCCCATGGGAGCTGTGATAACTACGCCAGATCATCATCATCATCATCATCAGATCATCATCATCATCACCATCATCATCATCATCATCATCATCAGATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCAGATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCAGATCATCATCATCATTACCATCATCATCATCATCATCATCATCATCAGATCATCATCAGATCATCATCATCATCAGATCATCATCATCATCATCATCATCGCCATCATCATCATCAGATCATCATCATCATTACCATCATCATCATCATCATCATCATCATCATCATCAGATCATCATCATCATCACCATCATCATCATCATCATCATCATCATCATCATCATCATCATCACCATCATCATCATCATCATCACCATCATCATCATCAGATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCACCACCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCAGATCATCATCATCATCATCACCATCATCATCATCATCAGATCATCATCATCATCAGATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATTATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCAGATCATCATCAGATCATCATCATCATCATCATCATCAGATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCAGATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCTACAAATGCAGTCCAAATGGACAGCTTGTTCCTTTGTTTGTTTGTTCAGTTATTTGATCATTCCTCTTCCCTTCCCTTCCATCCTATGCTCATTTGTTCATACAGCCATCCATTCATCATGTTTTCATTGTGGTGTTCCCTAGAAATTGCTGAGAGTTTTTCAAAAGCAGTCCACTTTAACACCTATGGTGGTAATGCAATAGTATCTGCAGTGGGGAAGGCTGTTCTTGAGGCCATTGACAATGACAACTTGCAAGAGAATTGTGTCACCACAGGGACATACCTCCTGGAAAGACTTCTTGAACTGAGAACAGAATTTCCAGAGTTTATTGGTGATGTGAGAGGCAAAGGACTAATGACAGGCATGGAGCTTGTTGTAGATAAGGAGAAAAAGACACCAATGCCCGCTGATCAAGTTGTACCTATTTGGGAAGAATGCAAAGATATGGGTTTATTACTTGGTAAAGGTGGACTGCATGGAAATGTAAGACCTCAGTGCGCTCTCTCTCTCCACACTGTAACAGAGTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTATGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATAATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATAGTGATGATGTTAATAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTATGATGTTAATAACTGTGTCTATAATGATGGTGATGATTAACTATGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATAGTGATGATGTTAATAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATAGTGATGATGTTAATAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTCTATAATGATGGTATGATGTTAGTAACTATGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTATGTCTATAATGATGGTGATGATGTTAGTAACTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATAATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATAGTGATGATGTTAATAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGTGATGATGTTAATAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATAGTGATGATGTTAATAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTCTATAATGATGGTATGATGTTAGTAACTATGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTATGTCTATAATGATGGTGATGATGTTAGTAACTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATAATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATAGTGATGATGTTAATAACTGTGTCTATAATGATGGTGATGATGTTTATAACTATGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATAGTGATGATGTTAATAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGGTGATGATGTTAATAACTGTGTCTATAATGATGGTGATGATGTTAGTAACTGTGTCTATAATGATGATGATGATGATGAT

Transcript

Actinostola_18965

Protein

Actinostola_18965

MDNVFENRSSVLQQKNAPLPAIELPSCDFEPEPYKGMPFDEAKDVRKSKLGPSLMVYYKNPVYIWKGHMQWLWDTSNKRYLDFFAGIVTVGAGHCHPHIIEAATTQLNKLWHTTNIYYNPTIHEYAQALAEKMPGNLKVCHFVNSGSEANDMALLMARAHTGNFDIVSLRNSYHGTSPGTLGILNQSPWKLNIPISFGCFATMNADVYRGPWGGGNCRDSVAQTTRSCNCAPGVCEASDNYVDQLEDMLIHCTGKRVAGFIAETIQGVGGSVHLPKGFLKKAYKLIRDRGGVCISDEVQCGFGRLGSHYWGFETQDVIPDIVTIAKGMGNGFPMGAVITTPDHHHHHHQIIIIITIIIIIIIIRSSSSSSSSSSSSSSSSSSSDHHHHHHHHHHHHHHQIIIIITIIIIIIIIIRSSSDHHHHQIIIIIIIIAIIIIRSSSSLPSSSSSSSSSSSDHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHQIIIIIIIIIIIIIIIIIIIIIIIIIIITTIIIIIIIIIIIIIIIRSSSSSSPSSSSSDHHHHQIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIRSSSDHHHHHHHQIIIIIIIIIIIIIIIIIIIIIIIRSSSSSSSSSSSSSSSSSSSSSSTNAVQMDSLFLCLFVQLFDHSSSLPFHPMLICSYSHPFIMFSLWCSLEIAESFSKAVHFNTYGGNAIVSAVGKAVLEAIDNDNLQENCVTTGTYLLERLLELRTEFPEFIGDVRGKGLMTGMELVVDKEKKTPMPADQVVPIWEECKDMGLLLGKGGLHGNVRPQCALSLHTVTECVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNYVYNDGDDVSNCVYNDGDDVSNCVYNNGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDSDDVNNCVYNDGDDVSNCVYNDGMMLITVSIMMVMINYVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDSDDVNNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDSDDVNNCVYNDGDDVSNCVYNDGMMLVTVSIMMVMMLVTVYNDGMMLVTMSIMMVMMLVTVSIMMVMMLVTVSIMMVMMLVTVSIMMVMMLVTVSIMMVMMLVTVSIMMVMMLVTVSIMMVMMLVTVSIMMVMMLVTMSIMMVMMLVTVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNNGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDSDDVNNCVYNDGDDVSNCVYNDVMMLITVSIMMVMMLVTVSIMMVMMLVTVSIMMVMMLVTVSIMMVMMLVTVSIMMVMMLVTVSIMMVMMLVNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDSDDVNNCVYNDGDDVSNCVYNDGMMLVTVSIMMVMMLVTVYNDGMMLVTMSIMMVMMLVTVSIMMVMMLVTVSIMMVMMLVTVSIMMVMMLVTVSIMMVMMLVTVSIMMVMMLVTVSIMMVMMLVTMSIMMVMMLVTVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNNGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDSDDVNNCVYNDGDDVYNYVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDSDDVNNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVSNCVYNDGDDVNNCVYNDGDDVSNCVYNDDDDDD

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00202	Aminotran_3	Aminotransferase class-III	Domain	Interproscan
PF21410	MAP6	Microtubule-associated protein 6	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005814	Family	Aminotransferase class-III	Interproscan
IPR007882	Family	Microtubule-associated protein 6	Interproscan
IPR015421	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR015422	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR023298	Homologous_superfamily	P-type ATPase, transmembrane domain superfamily	Interproscan
IPR049704	Conserved_site	Aminotransferases class-III pyridoxal-phosphate attachment site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45688	ALANINE--GLYOXYLATE AMINOTRANSFERASE 2, MITOCHONDRIAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000226	Biological Process	microtubule cytoskeleton organization	Interproscan
GO:0005516	Molecular Function	calmodulin binding	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0005874	Cellular Component	microtubule	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0008453	Molecular Function	alanine-glyoxylate transaminase activity	Interproscan
GO:0008483	Molecular Function	transaminase activity	Interproscan
GO:0009436	Biological Process	glyoxylate catabolic process	Interproscan
GO:0019481	Biological Process	L-alanine catabolic process, by transamination	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-